Gene Information

Name : PSEBR_a1604 (PSEBR_a1604)
Accession : YP_004352809.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1952528 - 1953211 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGGGCTCAAGCATTCTCACCGCGACGGACCTTAGCAAAGTGGTCTCCAGCGCGGAAGGTGAACTGACCATCCTGCACGA
ACTCAGCCTGGAACTGAACAAAGGCGATAGCCTGGCCATCGTCGGGGCGTCCGGTTCCGGCAAATCCACTCTCCTGGGCC
TGCTGGCCGGCCTCGACCTGCCCAGCAGCGGCGAGGTGACACTCGCCGGCCAAGCGCTCAGCGCTCTGGATGAAGACCAG
CGTGCGCGGATCCGCGCCGAGCATGTCGGCTTCGTCTTCCAGTCGTTCCAGTTGCTCGACAGCCTCAATGCACTGGAAAA
CGTCATGCTGCCGCTGGAACTTGACGGGCGCAAGGATGCCCGCGAACGGGCCACGCAACTGTTGCAGCGCGTCGGCCTGG
GCCAGCGCCTGACCCACTCGCCACGCCAGCTCTCCGGCGGCGAACAGCAACGCGTGGCGATTGCCCGCGCCTTTGCCGCC
GAGCCCGACGTGCTGTTTGCCGACGAACCCACCGGCAACCTCGACAGCCATACCGGCGAGCGCATCAGCGACCTGCTGTT
CGAATTGAACAAGGAACGCGGCACGACCCTGGTGCTGGTGACCCATGATGAACGCCTGGCCCATCGTTGCCGGCGCCTGA
TCCGACTTGAAGCCGGCGAGATGGTCGCCCCTCTGGAGCCTTGA

Protein sequence : 
MGSSILTATDLSKVVSSAEGELTILHELSLELNKGDSLAIVGASGSGKSTLLGLLAGLDLPSSGEVTLAGQALSALDEDQ
RARIRAEHVGFVFQSFQLLDSLNALENVMLPLELDGRKDARERATQLLQRVGLGQRLTHSPRQLSGGEQQRVAIARAFAA
EPDVLFADEPTGNLDSHTGERISDLLFELNKERGTTLVLVTHDERLAHRCRRLIRLEAGEMVAPLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-20 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-20 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-20 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-20 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 7e-18 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PSEBR_a1604 YP_004352809.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-27 48
PSEBR_a1604 YP_004352809.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-27 46