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Name : PSEBR_a1587 (PSEBR_a1587) Accession : YP_004352792.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 1933199 - 1935241 bp Length : 2043 bp Strand : + Note : - DNA sequence : ATGAGCAAAACCGCCGTCGCCAAGGCGCCGGAGCAACCGAAAACCGCAATCTCGGCCCTGTGGCGGCCAGCGCTGGTGCA AGCTTTCGTCAAGCTCGACCCGCGTCAATTGCACCGCGCCCCGGTGATGCTGGTGGTGGAACTGACCGCGATCCTCACCA CCGTGCTGTGCTTCATTCCCGACAACGCCGTGCCGACTTTTGTCGCCGCGCAAATCGCGCTGTGGCTGTGGTTCACCGTG CTGTTCGCCAACTTCGCCGAAGCGTTGGCCGAAGGCCGCGGCAAGGCTCGGGCCGACAGCCTCAAGGCCGGTAGCGAAGG CCTCAACGCACGTCGCCAGACCGCCAGCGGTTTTGAAATCGTCCCCGCCACCCGTCTGCGCAAAGGTGATGTGGTGCGCG TCGAGGCCGGCGACATGATCCCCGGCGACGGTGAAGTGATCGAAGGCATCGCCGCGGTCAACGAGGCTGCGATCACCGGC GAATCGGCGCCGGTCATCCGCGAGTCCGGCGGCGATCGCTCGGCCGTCACCGGCAATACGCGGCTGGTCTCCGACTGGCT GCTGATACGTATCACCAGCAATCCCGGCGAGTCCACACTGGACCGCATGATCGCCCTGGTCGAAGGCGCCAAACGCCAGA AAACGCCGAACGAGGTGGCGCTGGATATCCTGTTGATCGGCCTGACGCTGATCTTCCTGTTGGTGGTGGTGACGCTGCAA CCGTTCGCCCATTTCGCCAACGCCAACCTGCCGCTGGTGTTTCTGGTGGCGCTGCTGGTCACCTTGATTCCCACCACCAT CGGCGGGTTGCTGTCGGCCATCGGCATCGCCGGGATGGACCGGTTGGTTCGCCTGAACGTGATCGCCAAATCCGGTCGTG CGGTCGAGGCGGCGGGGGACGTGCATGTGCTGATGCTGGACAAGACCGGCACCATCACCTTTGGCAATCGTCGTTGTACA GCGGTCTATACCGCCCCTGGTGTGAGTGCCAAGGAACTGGCCGAAGGCGCGCTGTTCGCCTCGTTGGCTGACGACACCGC CGAGGGCAAGTCCATCGTCGAGTACCTGCGAGGTTTGCATCCACAGTCTGAGCCTGGCGTCGAAGCGCTGACGGCCGTGC CGTTCAGTGCTGAAACCCGTTTGTCCGGAGTCGACTATCAGGGCCGTATCTACCGCAAGGGCGCCGTGGACTCGTTGCTG GACTTCATCGGCCTTGCACGCAATGAGTTGCCGCAGGCATTGGCGCGGGAGGTCGACAAGATCGCCCAGAGTGGCGGCAC ACCGCTGCTGGTTTGCATGGACGGCCGGTTGCTGGGGGCCATCCATCTCAAGGACGTGGTCAAGCCGGGCATTCGCGAGC GCTTTGCCGAGCTGCGCAAGCTGGGGATCCGCACGGTGATGGTCACCGGTGACAACCCGCTGACCGCTGCGGCGATTGCC GCCGAGGCCGGTGTCGATGACGTGCTGGCAGAGGCCACGCCGGAGAAAAAGCTGGCGCGTATCCGTCATGAGCAAAATGA CGGTCGGCTGGTGGCCATGTGTGGCGACGGTGCCAACGACGCCCCGGCCCTGGCCCAGGCCGATGTCGGCATGGCGATGA ACGACGGCACCCAGGCCGCGCGGGAGGCGGCCAACATGGTCGACCTCGACAGCGACCCGACCAAACTGCTCGATGTGGTA CAGATCGGCAAGGAACTGTTGGTGACCCGTGGTGCATTGACCACCTTCTCCATCGCCAACGACATCGCCAAGTACTTCGC GATCCTGCCGGCGCTGTTCGCTTCGATTTATCCACAGCTCGGCGTGTTGAATGTGATGCACCTGAGCAGCCCCCAGAGCG CGATCCTGTCGGCCATCGTATTCAACGCCCTGATCATCGTCGTACTGATCCCCCTGGCCCTGCGCGGTGTACGAGTGCAA GCGGCAAGTGCGGCGGCGCTGTTGCGACGCAATCTGTTGATCTATGGCCTGGGTGGGATCGTGGTGCCGTTCGTGGGGAT CAAGGCGATCGATATGTTGCTGACGGCGTTGAAGCTGGTTTGA Protein sequence : MSKTAVAKAPEQPKTAISALWRPALVQAFVKLDPRQLHRAPVMLVVELTAILTTVLCFIPDNAVPTFVAAQIALWLWFTV LFANFAEALAEGRGKARADSLKAGSEGLNARRQTASGFEIVPATRLRKGDVVRVEAGDMIPGDGEVIEGIAAVNEAAITG ESAPVIRESGGDRSAVTGNTRLVSDWLLIRITSNPGESTLDRMIALVEGAKRQKTPNEVALDILLIGLTLIFLLVVVTLQ PFAHFANANLPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLMLDKTGTITFGNRRCT AVYTAPGVSAKELAEGALFASLADDTAEGKSIVEYLRGLHPQSEPGVEALTAVPFSAETRLSGVDYQGRIYRKGAVDSLL DFIGLARNELPQALAREVDKIAQSGGTPLLVCMDGRLLGAIHLKDVVKPGIRERFAELRKLGIRTVMVTGDNPLTAAAIA AEAGVDDVLAEATPEKKLARIRHEQNDGRLVAMCGDGANDAPALAQADVGMAMNDGTQAAREAANMVDLDSDPTKLLDVV QIGKELLVTRGALTTFSIANDIAKYFAILPALFASIYPQLGVLNVMHLSSPQSAILSAIVFNALIIVVLIPLALRGVRVQ AASAAALLRRNLLIYGLGGIVVPFVGIKAIDMLLTALKLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 9e-150 | 59 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-150 | 59 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 3e-125 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-126 | 55 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 2e-125 | 55 |
