|
Name : PSEBR_a1098 (PSEBR_a1098) Accession : YP_004352276.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein, MutS Family domain V Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1377379 - 1379958 bp Length : 2580 bp Strand : - Note : - DNA sequence : ATGAATACCGCCGTGAACGACCTCTCCAGCCACACGCCGATGATGCAGCAATACTGGCGCCTGAAGAACCAGCACCCCGA TCAGCTGATGTTCTACCGCATGGGCGACTTCTACGAAATCTTCTACGAGGACGCAAAGAAGGCCGCCAAGCTGTTGGACA TCACCCTGACGGCACGTGGGCAATCGGCGGGCATGGCCATTCCGATGTGCGGGATTCCTTACCACGCGGCAGAAGGTTAC CTGGCGAAGCTGGTCAAGCTCGGCGAATCCGTGGTGATCTGCGAACAAGTCGGCGACCCGGCCACCAGCAAGGGCCCGGT GGAACGCCAAGTCGTGCGGATCATCACCCCAGGCACGGTCAGTGACGAAGCCTTGCTGGATGAACGCCGGGACAACCTGA TCGCCGCAGTGCTGGGCGATGAACGCCTGTTCGGCCTGGCGGTGCTGGACATCACCAGCGGTAACTTCTCGGTACTGGAA ATCAAGGGCTGGGAAAACCTGCTGGCGGAACTGGAACGGGTCAATCCAGTAGAGCTTTTAATTCCTGATGACTGGCCCAA AGACCTGCCGGCAGAAAAACGCCGTGGCGTGCGTCGTCGGGCGCCGTGGGATTTTGAGCGTGATTCGGCGCTGAAAAGTC TCTGCCAGCAGTTTTCCACCCAGGACCTCAAGGGCTTCGGTTGCGAGAACCTGACCCTGGCCATCGGCGCTGCCGGTTGC CTGCTGGCCTACGCCAAGGAAACCCAGCGCACCGCCCTGCCCCACTTGCGCAGCCTGCGGCACGAACGCCTGGATGACAC CGTGGTGCTGGACGGCGCGAGCCGCCGCAACCTGGAACTGGACACCAACCTGGCCGGCGGGCGCGACAACACCTTGCAAT CGGTGGTCGATCGCTGCCAGACCGCCATGGGCAGCCGCCTGCTGACACGCTGGTTGAATCGGCCGCTGCGGGACTTGACC GTGCTGCTGGCGCGCCAGTCCTCCATTACCTGCCTGCTGGATCGTTATCGCTTCGAGCAGTTGCAACCGCAGCTCAAGGA AATCGGTGACATCGAGCGGATTCTCGCCCGCATCGGTTTGCGCAACGCCCGTCCCCGCGACCTGGCGCGCCTGCGCGATG CCCTCGGCGCGTTGCCCGAATTGCAGGTGGCGATGACCGACCTCGAAGCGCCACACCTGCAGCAACTGGCGCGCACCACC AGCACCTACCCGGAGCTGGCCGCGCTGCTGGAAAAAGCCATTATCGATAACCCACCCGCGGTGATCCGTGACGGTGGCGT GCTGAAAACCGGCTACGACGCCGAACTCGACGAGCTGCAAGCGCTGAGCGAGAACGCCGGCCAGTTCCTGATCGACCTCG AAGCCCGGGAAAAAGCCCGTACCGGCCTTGCCAACCTCAAGGTCGGCTACAACCGCATCCACGGTTATTTCATCGAATTG CCGAGCAAGCAGGCCGAACAGGCACCAGCCGATTATGTTCGCCGCCAGACCCTCAAGGGCGCCGAGCGTTTCATCACCCC GGAACTCAAGGCGTTCGAAGACAAGGCGCTGTCGGCCAAGAGCCGCGCCCTGGCCCGGGAAAAGATGCTCTATGAAGCGT TGCTCGAAGACCTGATCAGCCAACTGCCGCCGTTACAGGACACTGCTGGCGCCCTAGCGGAACTGGATGTGCTGAGCAAC CTGGCCGAACGCGCGCTGAACCTGGACCTCAATTGCCCGCGCTTCGTCAGTGAGCCGTGCATGCGCATCAGCCAGGGTCG TCACCCGGTGGTCGAGCAAGTACTGACCACGCCGTTCGTGGCCAACGACCTGAGCCTGGACGACAACACCCGCATGCTGG TGATCACCGGCCCGAACATGGGCGGTAAATCCACCTACATGCGCCAAACCGCGTTGATCGTGCTGCTGGCCCATATTGGC AGCTTCGTTCCGGCGGCCAGCTGCGAATTGTCCCTGGTGGACCGGATCTTCACCCGCATCGGCTCCAGCGACGACCTGGC CGGTGGACGTTCGACGTTCATGGTGGAAATGAGCGAAACCGCGAACATTCTGCACAACGCCACCGAACGCAGCCTGGTGC TGATGGACGAAGTCGGACGCGGCACCAGCACCTTCGACGGCTTGTCCCTGGCCTGGGCAGCGGCCGAACGCCTCGCGCAC CTGCGGGCCTACACGCTGTTCGCCACCCATTACTTCGAACTCACCGTGTTGCCGGAAAGCCAGCCTTTGGTGGCCAACGT CCACCTCAATGCCACCGAGCACAACGAACGCATCGTCTTCCTGCACCACGTGCTGCCCGGCCCGGCCAGCCAGAGCTACG GCCTGGCGGTGGCGCAACTGGCCGGCGTGCCAAGTGAAGTCATTACCCGTGCCCGCGAGCACCTGAGCCGCCTGGAAACC ACCAGCCTGCCCCACGAAGCGCCGCGCCCGACCAAAGGCAAACCGGCCGCACCGCAGCAAAGCGACCTGTTCGCCAGCCT GCCGCATCCGGTACTCGATGAACTGGCCAAGCTCGATCTGGACGACCTGACACCTCGTCGGGCACTGGATTTACTCTATA CATTGAAGACACGGATCTAA Protein sequence : MNTAVNDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYHAAEGY LAKLVKLGESVVICEQVGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAAVLGDERLFGLAVLDITSGNFSVLE IKGWENLLAELERVNPVELLIPDDWPKDLPAEKRRGVRRRAPWDFERDSALKSLCQQFSTQDLKGFGCENLTLAIGAAGC LLAYAKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMGSRLLTRWLNRPLRDLT VLLARQSSITCLLDRYRFEQLQPQLKEIGDIERILARIGLRNARPRDLARLRDALGALPELQVAMTDLEAPHLQQLARTT STYPELAALLEKAIIDNPPAVIRDGGVLKTGYDAELDELQALSENAGQFLIDLEAREKARTGLANLKVGYNRIHGYFIEL PSKQAEQAPADYVRRQTLKGAERFITPELKAFEDKALSAKSRALAREKMLYEALLEDLISQLPPLQDTAGALAELDVLSN LAERALNLDLNCPRFVSEPCMRISQGRHPVVEQVLTTPFVANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIG SFVPAASCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLAH LRAYTLFATHYFELTVLPESQPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSEVITRAREHLSRLET TSLPHEAPRPTKGKPAAPQQSDLFASLPHPVLDELAKLDLDDLTPRRALDLLYTLKTRI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEBR_a1098 | YP_004352276.1 | DNA mismatch repair protein, MutS Family domain V | VFG0562 | Protein | 0.0 | 59 |
