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Name : PSEBR_a1024 (PSEBR_a1024) Accession : YP_004352201.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 1297165 - 1298667 bp Length : 1503 bp Strand : + Note : - DNA sequence : ATGAGCGACCTAGAACTCGACCCGCAAGCCCTGCAACAGGAAGAAAACTCCCTGATCGCCCTGCGCAAGGAAAAGCTTGC TGCCGAGCGCGCCAAGGGCCAGGCCTTCCCCAACGACTTCCGCCGCGACGCCTACTGCGACGTCTTGCAGAAGCAGTATG CGGACAAGACCAAGGAAGAGCTGGCCGAGGCGGCGATTCCAGTCAAGGTGGCCGGTCGTATCGTGCTCGATCGTGGTTCG TTCATGGTGATCCAGGACATGACCGGGCGCCTCCAGGTCTACGTCAACCGCAAGACCCTGCCGGAAGAAACCCTGGCCGC CGTCAAGACCTGGGACCTGGGCGACATCATTGCCGCCGAAGGCACCCTGGCCCGTTCCGGCAAGGGCGACCTGTACGTCG AGATGACCAGCGTGCGCCTGCTGACCAAGTCCCTGCGCCCGCTGCCGGACAAGCACCACGGCCTGACCGACACCGAGCAG CGCTATCGCCAGCGCTACGTCGACCTGATCGTCAACGAAGACGTGCGCCAGACGTTCCGCGTGCGCTCGCAAGTCATCGC CCACATCCGCAGCTTCCTGATGAAGCGTGACTTCCTGGAAGTCGAGACGCCGATGCTGCAGACCATCCCTGGCGGTGCGG CGGCCAAGCCGTTCGAAACCCACCACAACGCCCTGGACATGGAAATGTTCCTGCGTATCGCGCCGGAGCTGTACCTCAAG CGTCTGGTTGTGGGTGGCTTCGAAAAGGTCTTCGAGATCAACCGCAACTTCCGTAACGAAGGTGTTTCGACCCGGCACAA CCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTACGCCGACTACGAAGACAACATGGACCTGACCGAGGAACTGTTCC GCGAGCTGGCCCAGCTTGTTCTCGGGACGACCGACGTGCCGTACGGCGACAAGGTGTTCCACTTCGGCGAGCCGTTCGTG CGCCTGTCGGTGTTCGACTCGATCCTCAAGTACAACCCTGAACTGACTGCCGATGATCTGAACGACATCGAAAAGGCTCG CGCCATCGCCAAGAAGGCCGGTGCCAAGGTGCTCGGCTTCGAAGGTCTGGGCAAGCTGCAAGTGATGATTTTCGAAGAGC TGGTCGAGCACAAGCTGGAGCAGCCGCACTTCATCACCCAGTACCCGTTCGAAGTGTCGCCGCTGGCCCGTCGTAACGAC GAGAACCCAAGCGTGACCGACCGTTTCGAGCTGTTCATCGGTGGCCGTGAAATCGCCAACGCCTATTCCGAGCTCAACGA TGCAGAAGACCAGGCCGAGCGTTTCATGGCCCAGGTGGCTGACAAGGACGCCGGCGACGACGAAGCCATGCACTACGATG CCGACTTCGTGCGTGCCCTGGAGTACGGCATGCCGCCGACCGCTGGCGAAGGCATCGGCATCGATCGCCTGGTGATGTTG TTGACCAACTCACCGTCGATCCGGGACGTGATTCTCTTCCCGCACATGCGGCCTCAAGCGTAA Protein sequence : MSDLELDPQALQQEENSLIALRKEKLAAERAKGQAFPNDFRRDAYCDVLQKQYADKTKEELAEAAIPVKVAGRIVLDRGS FMVIQDMTGRLQVYVNRKTLPEETLAAVKTWDLGDIIAAEGTLARSGKGDLYVEMTSVRLLTKSLRPLPDKHHGLTDTEQ RYRQRYVDLIVNEDVRQTFRVRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLVLGTTDVPYGDKVFHFGEPFV RLSVFDSILKYNPELTADDLNDIEKARAIAKKAGAKVLGFEGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRND ENPSVTDRFELFIGGREIANAYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML LTNSPSIRDVILFPHMRPQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-133 | 60 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 8e-77 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PSEBR_a1024 | YP_004352201.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 4e-133 | 60 |
