Gene Information

Name : PSEBR_a94 (PSEBR_a94)
Accession : YP_004351227.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : cytochrome-c oxidase subunit I
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : -
Position : 113990 - 115582 bp
Length : 1593 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGCTGTGATCGATGACCACGGTCATGCCGGCGCCGACCACGCCCATGGCCCCGCCAAGGGCCTGATGCGCTGGGT
ACTGACCACCAACCACAAGGATATCGGCACGCTGTACCTGTGGTTCGCGTTCTCCATGTTCCTGTTGGGCGGCTCGTTCG
CCATGGTGATCCGCGCCGAGCTGTTCCAGCCCGGCCTGCAGATCGTGGAGCCGGCGTTCTTCAACCAGATGACCACCATG
CATGGCCTGGTGATGGTCTTCGGCGCGGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATCCCGCTGATGATCGG
CGCGCCGGACATGGCCCTGCCGCGCATGAACAACTTCAGCTTCTGGCTGTTGCCGGCCGCGTTCCTGCTGCTGGTGTCGA
CGTTGTTCACAGCCGGTGGCGGGCCTAACTTCGGTTGGACCTTCTACGCGCCGCTGTCCACCACTTATGCGCCGGAAAGC
GTGACGTTCTTCATCTTCGCCATCCACCTGATGGGCATCAGCTCGATCATGGGCGCGATCAACGTGATCGCCACCATCCT
CAACCTGCGCGCCCCTGGCATGACCCTGATGAAGATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGCTGA
TCGCAGTGATGCCAGTGCTGGCCGGCTGCGTGACGATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAGTGCC
GCCGGTGGCGGTGACCCGGTGCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCACCCCGAGGTGTACATCATGATCCTGCC
GGCCTTCGGTGCCGTCAGCTCGATCATCCCGGCCTTCTCGCGCAAGCCGTTGTTCGGCTACACCTCGATGGTCTATGCCA
CGGCCGCCATTGCGTTCCTGTCGTTCATCGTCTGGGCGCACCACATGTTCGTGGTCGGCATTCCGCTGGTGGGCGAGCTG
TTCTTCATGTACGCCACCCTGCTGATCGCCGTGCCCACCGGGGTGAAGGTGTTCAACTGGGCCAGCACCATGTGGCAAGG
CTCGCTGACCTTCGAAACGCCGATGCTGTTTGCCGTGGCGTTCGTGATCCTGTTTTCCATCGGTGGTTTCTCCGGGCTGA
TGCTGGCCATCGCCCCGGCGGACTTCCAGTACCAGGACACCTACTTCGTGGTCGCGCACTTCCACTATGTGCTGGTGCCC
GGCGCGATCTTCGGGATCTTCGCCTCGGCCTACTACTGGCTGCCGAAATGGACCGGCCACATGTACGACGAAACCCTCGG
CAAGCTGCACTTCTGGCTGTCGTTCGTCGGGATGAACATGGCGTTCTTCCCGATGCACTTCGTCGGCCTGGCGGGCATGC
CCCGGCGGATTCCCGACTACAACCTGCAGTTCGCCGACTTCAACATGGTCTCGTCCATCGGCGCGTTCATGTTCGGCACC
ACGCAGATCTTCTTCCTGTTCATCGTGATCAAGACCATCCGAGGCGGCCCGCCCGCACCGGCCAAGCCTTGGGATGGTGC
CGAAGGGTTGGAGTGGAGCGTGCCGTCGCCGGCGCCGTATCACACCTTCACTACGCCGCCGGAAGTGAAATAG

Protein sequence :
MSAVIDDHGHAGADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFSMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTM
HGLVMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFTAGGGPNFGWTFYAPLSTTYAPES
VTFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSA
AGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATAAIAFLSFIVWAHHMFVVGIPLVGEL
FFMYATLLIAVPTGVKVFNWASTMWQGSLTFETPMLFAVAFVILFSIGGFSGLMLAIAPADFQYQDTYFVVAHFHYVLVP
GAIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGT
TQIFFLFIVIKTIRGGPPAPAKPWDGAEGLEWSVPSPAPYHTFTTPPEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 2e-98 48