Gene Information

Name : PSEBR_a994 (PSEBR_a994)
Accession : YP_004352171.1
Strain : Pseudomonas brassicacearum NFM421
Genome accession: NC_015379
Putative virulence/resistance : Unknown
Product : Site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1262543 - 1263439 bp
Length : 897 bp
Strand : +
Note : -

DNA sequence :
ATGCCAGCCATCGATCATCCGCTGATAGACCAGTTTCTCGACGCCCTGTGGCTGGAGAAGGGCCTGTCCGATAACACCCG
CGATGCCTATCGCAGTGACCTGGCGCTGTTCAACGGTTGGCTGCAGGAAAACCACCTGGAACTGATCAATGCCGGCCGGG
AGCTGATCCTCGATCACTTGGCGTGGCGCCTGGAGCAGAACTACAAACCGCGCTCGACGGCTCGGTTTCTCTCCGGCCTG
CGTGGGTTCTATCGCTATTTGCTGCGGGAAAAGCTGATCGCGGTGGACCCGACCTTGCGCGTGGAAATGCCGCAATTGGG
GCGTCCATTGCCCAAGTCCCTCTCGGAAGCCGATGTGGAAGCGCTGCTGGCGGCACCCGACCTCAGCGAAGCCATCGGTC
AGCGCGACCGTGCCATGCTGGAAGTCTTGTACGCTTGCGGCCTGCGGGTCACCGAGTTGATCAGCTTGACGCTGGAGCAG
GTCAACCTGCGCCAGGGCGTGCTGCGTGTGATGGGCAAAGGCAGCAAGGAGCGCCTGGTGCCGATGGGTGAGGAAGCGAT
CGTCTGGGTCGAGCGCTACATGCGCGATGCCCGCCACGAACTGCTGGGCGGGCGCCCCAGCGACGTACTGTTCCCCAGCC
TGCGCGGCGAGCAGATGACCCGCCAGACCTTTTGGCACCGGATCAAGCACCAGGCCAAGGTGGCCGGGATCAACAAATCC
CTCTCGCCCCACACCCTGCGCCATGCCTTCGCCACGCACCTGCTCAACCACGGCGCCGACCTGCGGGTGGTACAGATGCT
GCTCGGCCACAGCGACCTCTCCACCACCCAGATCTACACCCACGTCGCCCGGGCACGGCTGCAGGACCTGCATGCCAAAC
ACCACCCTCGCGGTTGA

Protein sequence :
MPAIDHPLIDQFLDALWLEKGLSDNTRDAYRSDLALFNGWLQENHLELINAGRELILDHLAWRLEQNYKPRSTARFLSGL
RGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQ
VNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARHELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGINKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-67 55
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-67 55