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Name : PSEBR_a954 (PSEBR_a954) Accession : YP_004352127.1 Strain : Pseudomonas brassicacearum NFM421 Genome accession: NC_015379 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1215145 - 1216791 bp Length : 1647 bp Strand : + Note : - DNA sequence : ATGCAAGACTGGCAACGCTCAGTGATCTACCAGATTTATCCAAAAAGTTTCTACAGCCATGGCGGCCAGGCCACCGGTGA TTTGCGAGGGGTGGTGGACAAGCTCGACTACCTGCACTGGCTGGGTGTGGATTACCTGTGGCTGACACCGTTCCTGCGTT CGCCGCAACGGGACAACGGCTACGACATCAGCGACTACTACGCCATCGACCCCAGCTACGGCACCATGGCCGATTGCGAA TTATTGATTACCGAAGCGAGCAAGCGCGGTATCAAGCTGATGCTCGACATCGTGGTCAATCACACCTCCATCGAGCATCC CTGGTTCCAGGCCGCCCGCAGCAGCCTCGACAACCCGTACCGCGATTTCTATATCTGGCGGGACCAGCCGAACAACTGGG AATCCAAGTTCGGCGGCTCGGCCTGGGAGTACGAAGCGCAGACCGGCCAGTATTACCTGCACCTGTTCGACCACACCCAG GCCGACCTGAACTGGGACAACCCCCAGGTGCGCGCCGAAGTGTTCAAGATGATGCGTTTCTGGCGGGACAAGGGGGTGGG GGGCTTTCGTCTCGATGTGATCAACCTGATCTCCAAGCCGGCCGACTTCCCTGACGATCATACCGATGGCCGGCGTTTTT ATACCGACGGTCCTAACGTGCATCGCTACCTGCAGGAAATGCATCGGGAGGTCTTCGAGGGGTTCGACCTGATCAACGTC GGCGAGATGTCGTCCACCAGTCTCGAACACTGTGTTCGTTATTCGTGTCCGGCGTCCCGTGAACTGTCGATGACGTTCAA TTTCCATCACTTGAAGGTGGACTACCCGAACCTGCAAAAGTGGGTGCGGGCCGACTTCGATTTTCTTGAACTCAAACGCA TCCTGTCCGACTGGCAAGTCGGCATGCAGGCCGGTGACGGTTGGAATGCGCTGTTCTGGTGTAACCATGACCAGCCGCGG GTGGTGTCGCGGTTCGGTGATGACGGCGAGTACCGCGAGCCTTCGGCGAAGATGCTCGCCACGGCGTTGCACTTTCTCCA GGGCACCCCGTTCGTGTACCAGGGCGAGGAGTTGGGGATGACCAATCCGGGCTTCGAGCACATCGAGCAGTATCGCGATG TGGAAACCCTGAACATCTATCGTCTCAAGCGCAACGCCGGGGTGTCGGAGGCCAACGCCATGGCATCGATCATGCAGAAA TCCCGTGACAACGGGCGCACGCCGATGCAATGGAATGCCGGGCCGAACGCAGGTTTCAGCCGGGCCGAACCCTGGATCGG CGTGCCCGCCAACGCCGCGTTCATCAACGTCGAGCAGCAACAGCAAGACCCGACCTCGGTGCTGCATTACTACCGTCAAT TGATCGCCCTGCGCCGCAGCGAAGCCTTGATCCAGGACGGCGTCTACCGCCTGCTATTGCCCGAACATCCACACGTGTGG GCGTACCTGCGCGAAGGGCAGGGCGAGCGCCTGTTGGTGGTCAGCCATTTTTATGGAGGCGACTGCGAGGTGGAACTGCC CGAAGGAGTCCTCACCCATGACACGAAACAACGCTGGGTGATCGGCAACTACGAGGCCGGCGAACACCGATACCGACGGC TGCGCTTGCGGCCTTACGAGTCGTTTGTGTTGCACCTGAGCGACTGA Protein sequence : MQDWQRSVIYQIYPKSFYSHGGQATGDLRGVVDKLDYLHWLGVDYLWLTPFLRSPQRDNGYDISDYYAIDPSYGTMADCE LLITEASKRGIKLMLDIVVNHTSIEHPWFQAARSSLDNPYRDFYIWRDQPNNWESKFGGSAWEYEAQTGQYYLHLFDHTQ ADLNWDNPQVRAEVFKMMRFWRDKGVGGFRLDVINLISKPADFPDDHTDGRRFYTDGPNVHRYLQEMHREVFEGFDLINV GEMSSTSLEHCVRYSCPASRELSMTFNFHHLKVDYPNLQKWVRADFDFLELKRILSDWQVGMQAGDGWNALFWCNHDQPR VVSRFGDDGEYREPSAKMLATALHFLQGTPFVYQGEELGMTNPGFEHIEQYRDVETLNIYRLKRNAGVSEANAMASIMQK SRDNGRTPMQWNAGPNAGFSRAEPWIGVPANAAFINVEQQQQDPTSVLHYYRQLIALRRSEALIQDGVYRLLLPEHPHVW AYLREGQGERLLVVSHFYGGDCEVELPEGVLTHDTKQRWVIGNYEAGEHRYRRLRLRPYESFVLHLSD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 1e-120 | 46 |
