Gene Information

Name : bgla_2g02720 (bgla_2g02720)
Accession : YP_004348260.1
Strain :
Genome accession: NC_015376
Putative virulence/resistance : Virulence
Product : type III secretion inner membrane protein SctS
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 361791 - 362054 bp
Length : 264 bp
Strand : -
Note : -

DNA sequence : 
ATGGATGTCGATTCGCTGATCAGGTTTACCACGCAGGGCATGCTGTTGTGTCTCACGGTTTCGCTGCCGCCGGTGATCGT
GGCGGCCGTGGTCGGGCTGGGGGTGTCGTTCGTGCAGGCGATCACGTCGTTGCAGGACCAGACCTTGCCGCAGGTGATCA
AGCTGATCGCGGTGACCATCACCATCATCGTGGCGGCGCCGGTTTGCTGCGCGGCGGTGCTGCATTTCGCCAACCAGATG
ATGCGCACGGCCGTGCCGCTTTGA

Protein sequence : 
MDVDSLIRFTTQGMLLCLTVSLPPVIVAAVVGLGVSFVQAITSLQDQTLPQVIKLIAVTITIIVAAPVCCAAVLHFANQM
MRTAVPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS AAD21322.1 HrcS Virulence Hrp PAI Protein 7e-11 48
hrcS BAB07863.1 HrcS Virulence Hrp PAI Protein 7e-11 48
hrcS YP_362152.1 HrcS protein Virulence Hrp PAI Protein 1e-10 48
hrcS YP_198719.1 hypothetical protein Virulence Hrp PAI Protein 1e-10 48
XC_3017 YP_244085.1 HrcS protein Virulence Hrp PAI Protein 5e-09 47
hrcS NP_636599.1 HrcS protein Virulence Hrp PAI Protein 5e-09 47
hrcS NP_640756.1 HrcS protein Virulence Hrp PAI Protein 1e-10 47
hrcS AAP34350.1 HrcS Virulence Hrp PAI Protein 9e-11 47
ssaS NP_460385.1 type III secretion system apparatus protein Virulence SPI-2 Protein 0.093 45
ssaS NP_456108.1 putative type III secretion protein Virulence SPI-2 Protein 0.10 45
ssaS CAA68200.1 secretion system apparatus, SsaS Virulence SPI-2 Protein 0.065 45
ssaS NP_805091.1 type III secretion protein Virulence SPI-2 Protein 0.10 45
ssaS YP_216428.1 secretion system apparatus protein SsaS Virulence SPI-2 Protein 0.093 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
bgla_2g02720 YP_004348260.1 type III secretion inner membrane protein SctS VFG0520 Protein 0.026 45