Gene Information

Name : Fluta_0644 (Fluta_0644)
Accession : YP_004343486.1
Strain : Fluviicola taffensis DSM 16823
Genome accession: NC_015321
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 747118 - 748023 bp
Length : 906 bp
Strand : +
Note : COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR011932:IPR004107:IPR002104; KEGG: bfs:BF4279 tyrosine recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine ty

DNA sequence : 
TTGAAAAATTGGGAACGTACTATTAAACAATTTGTTCATTATTTGAAGATTGAACGAAGCTTGGCTGAAAATTCCATTTT
CGCTTATCAACAAGATATTGCGAAGTTACGTGACTTTTGCGAATCTTACACACTTTCTCCTGAACACATTCAAACTGGGC
ATTTAAAACAATTTGTTGCAGAGCTTTATGATATGGGATTAAGTGCACGTTCACAAGCCCGAATAATCAGTGGTTGGAAA
CAATTTTTCGACTTTTTAGTCTTGGAAGAAATCCGTAAAGACGACCCTTCTGAAGCATTGGAACTTCCTAAAATTGGCAG
AAAACTACCCGAAGTATTGACAATCGAAGAAATTGATGCATTGATTGATGCGATTGATTTAAGTTCGAATGAAGGTCAGC
GAAACAAAGCAATTCTCGAAACCCTTTATAGCTGTGGAATTCGTGTAAGCGAGTTAGTTTCTTTGCGCTTTGAAGATTGT
TTTTTCGAAGAAGGATTTATTCGTGTAATCGGAAAAGGAAACAAGGAACGATTGGTTCCTGTGAGTCCAAGTGTGATTGA
AGAAGTTGGTGAATATGTAGAACATGACCGAAGTAACTTATTAATCAAAAAAGGCCATGAACAATTTGTATTTCTCAATA
GACGTGGCGCTCAATTAACACGTGTCATGATTTTCACGATTATCAAACGTTTAGCAGATTTAGCTGGGATTAAAAAGAAT
ATTAGTCCACACACGTTTCGACATTCTTTTGCCACTCATCTCATTGAAGGTGGCGCAAATCTACGTGCGATTCAAGATAT
GTTGGGCCATGAAAGCATTACCACTACCGAAATTTACACGCATTTAGATCAACGTTTTTTGCGCGAAGCAATTTTGAGTT
ATCACCCACGGAATACTTTAAACTAA

Protein sequence : 
MKNWERTIKQFVHYLKIERSLAENSIFAYQQDIAKLRDFCESYTLSPEHIQTGHLKQFVAELYDMGLSARSQARIISGWK
QFFDFLVLEEIRKDDPSEALELPKIGRKLPEVLTIEEIDALIDAIDLSSNEGQRNKAILETLYSCGIRVSELVSLRFEDC
FFEEGFIRVIGKGNKERLVPVSPSVIEEVGEYVEHDRSNLLIKKGHEQFVFLNRRGAQLTRVMIFTIIKRLADLAGIKKN
ISPHTFRHSFATHLIEGGANLRAIQDMLGHESITTTEIYTHLDQRFLREAILSYHPRNTLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 9e-39 41
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 9e-39 41