Gene Information

Name : Fluta_3275 (Fluta_3275)
Accession : YP_004346085.1
Strain : Fluviicola taffensis DSM 16823
Genome accession: NC_015321
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3751528 - 3754047 bp
Length : 2520 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR001943:IPR013093:IPR 019489:IPR003593; KEGG: sli:Slin_1370 ATPase AAA-2 domain protein; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/Uvr

DNA sequence :
ATGGAAGCAAAATTTTCACCCCGCGTAAAAGACGTACTGAGCTTCAGTAGAGAAGAGGCTTTGCGTTTGGGAAATGATTT
TATTGGGGTAGAACATTTTTTGCTTGGAATTTTGCGAGAAGGAGAAGGGAATGCCGTTCGAATTCTTACTGGGTTTAATT
TGGATTTACCGAAATTGAAAACAGAATTAGAAAAACCGTTGCTGGATGCTTCAAAATCTAATTCGACTGCTGGAGCGAAT
ATTCCGCTGGTAAAACAGGCAGAACGTTTGTTAAAAATAACTTATTTGGAAGCTAAATTGTTCAAGAGTCCTATGATAGG
TACAGAACATTTGTTACTTTCGATGTTAAAGGATGAAGATTCCGTAGTTTGCAGCGTCTTAAATCGCTACGGAGTAAATT
ATAATACAGTTCACGAGGAATTAGAAAACATGGTCGACGAAAATAAATTACCAAGAGCAGAAATGTCATCGTCTTCTGAA
GATGATGATCAAACATTTGGAGCGAGCCAAAGAAAAGCTACAGACCCTAAATCTAAAACACCTGTTTTGGATAATTTCGG
TCGTGACTTAACGAAAATGGCAGAAGCTGGAAAGCTTGACCCAATTGTAGGGCGTGAAAAAGAAATTGAGCGGGTGTCTC
AAATTTTGTCACGTAGAAAGAAAAATAATCCAATTTTGATTGGTGAACCAGGGGTTGGTAAAAGTGCCATCGCTGAAGGT
TTAGCATTGCGAATTGTGCAACGTAAAGTTTCACGTATTTTGTTTAATAAACGTATTGTATCTTTGGATTTAGCTTCAAT
GGTTGCGGGAACAAAATACCGCGGACAGTTTGAAGAGCGTATGAAAGCTGTAATGGCTGAAATCGAAAAGAATCCAGATA
TCATCTTGTTTATTGATGAAATTCACACCATTATTGGTGCTGGAGGAGCAAGTGGTTCGTTGGATGCTTCAAATATGTTT
AAACCAGCTTTGGCTCGCGGTGAAATGCAGGCTATTGGTGCAACAACTTTGGATGAGTACAGACAATACATTGAAAAAGA
TGGTGCTTTAGAGCGTCGTTTCCAAAAAGTATTGATTGAACCAACAACAATCGATGAAACTGTTCAAATCTTGAATAACA
TCAAAGAACGTTACGAAGATCACCACATGGTTAGTTATACTCCAGAAGCAATTGCTGCTTGTGTGAAATTGACTGAACGT
TATATTACAGATCGTCATTTACCAGATAAAGCAATCGATGCCTTAGATGAAGTAGGTTCTCGTGTTCACATTACAAACAT
CAATGTTCCTCAAGAAATTATTGATATTGAACAAGAAATTGAAGAGCTAAAAGATCAGAAGAACGAAGTTATTAAATCGC
AGCAATACGAGAAAGCAGCTGAGTTACGTGATTCTGAACGCAAATTGCAAGACCGATTGGAGGATGCTAAAAAGCGTTGG
GAAGACGATTCTAAAGCAAAAAGAGTAGTAGTTACTGAAGAAGATGTTGCTGAGGTTGTTTCTATGATGTGTGGAATTCC
AGTGACGCGAGTTGCACAAACAGAAATGGGCAAATTGGCGACCATGTCTGAAGAACTTCAAGGAAAAGTAATCGGACAAC
AGGAAGCTGTTGAAAAAGTGGTTAAAGCAATTCAACGAAATAGAGCAGGATTGAAAGATCCGAATAAACCAATTGGTTCA
TTTTTCTTCCTAGGACCAACAGGTGTCGGAAAAACACAATTGGCAAAAGTGCTTGCAAAGTATTTATTTGATACAGAAGA
TGCGTTGATTCGTATTGATATGTCTGAATACATGGAGAAATTCTCGATATCAAGATTGGTTGGAGCGCCTCCGGGATACG
TTGGGTATGAAGAGGGAGGACAGTTGACTGAAAAAGTGAGACGTAAACCGTATTCAATCATTTTATTGGATGAGATTGAA
AAAGCACATCCAGATGTATTCAATTTGTTACTTCAAGCATTGGATGATGGGCACATGACGGATGGTTTGGGTCGTAAGAT
TGACTTTAAAAATACCATTCTGATTATGACTTCAAATATTGGTGCTCGTCAGTTAGCTGATTTTGGTGCAGGAGTAGGAT
TCGGAACAAAATCACAAACAGATCAACGTGATGAAAATGCAAAAACAGTGATTCAAAATGCATTGCGTAAAGCATTCTCT
CCAGAATTCTTGAATCGTATTGATGACATGATTATTTTCCATTCATTGACTCGCGAAAACATTCACAAAATCATTGATTT
GGAGTTGGTTAAATTGTTTGATCGTATTGCGGCATTGGGTTACCAAGCTTCAATGACTGATAAAGCAAAAGATTTCATTG
TAGACAAAGGATACGATGAGAAATTTGGGGCTCGTCCATTGAAAAGAGCGATTCAGAAGTATATCGAGGATCCATTGGCA
GAGGAAATCATCAAAACAAATTTGCAAGAAGGAGATTCAATTGTTTTGGATATCGATGAGGCAAATATCGCTTTGAAAAT
TACCATCGGAAAAGGTAAATCGAAAGCAACAAAAAAGTAA

Protein sequence :
MEAKFSPRVKDVLSFSREEALRLGNDFIGVEHFLLGILREGEGNAVRILTGFNLDLPKLKTELEKPLLDASKSNSTAGAN
IPLVKQAERLLKITYLEAKLFKSPMIGTEHLLLSMLKDEDSVVCSVLNRYGVNYNTVHEELENMVDENKLPRAEMSSSSE
DDDQTFGASQRKATDPKSKTPVLDNFGRDLTKMAEAGKLDPIVGREKEIERVSQILSRRKKNNPILIGEPGVGKSAIAEG
LALRIVQRKVSRILFNKRIVSLDLASMVAGTKYRGQFEERMKAVMAEIEKNPDIILFIDEIHTIIGAGGASGSLDASNMF
KPALARGEMQAIGATTLDEYRQYIEKDGALERRFQKVLIEPTTIDETVQILNNIKERYEDHHMVSYTPEAIAACVKLTER
YITDRHLPDKAIDALDEVGSRVHITNINVPQEIIDIEQEIEELKDQKNEVIKSQQYEKAAELRDSERKLQDRLEDAKKRW
EDDSKAKRVVVTEEDVAEVVSMMCGIPVTRVAQTEMGKLATMSEELQGKVIGQQEAVEKVVKAIQRNRAGLKDPNKPIGS
FFFLGPTGVGKTQLAKVLAKYLFDTEDALIRIDMSEYMEKFSISRLVGAPPGYVGYEEGGQLTEKVRRKPYSIILLDEIE
KAHPDVFNLLLQALDDGHMTDGLGRKIDFKNTILIMTSNIGARQLADFGAGVGFGTKSQTDQRDENAKTVIQNALRKAFS
PEFLNRIDDMIIFHSLTRENIHKIIDLELVKLFDRIAALGYQASMTDKAKDFIVDKGYDEKFGARPLKRAIQKYIEDPLA
EEIIKTNLQEGDSIVLDIDEANIALKITIGKGKSKATKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-177 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fluta_3275 YP_004346085.1 ATPase AAA VFG0080 Protein 5e-150 51
Fluta_3275 YP_004346085.1 ATPase AAA VFG0079 Protein 0.0 49