Gene Information

Name : Fluta_2803 (Fluta_2803)
Accession : YP_004345621.1
Strain : Fluviicola taffensis DSM 16823
Genome accession: NC_015321
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 3229693 - 3231540 bp
Length : 1848 bp
Strand : +
Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: fps:FP0428 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM

DNA sequence :
ATGAAAAAATCAGATCAAACACCAAAAGAAGGAAGCCTTACGATAGGTGCTATTTCAGGATCAAAGAAGGTCTACGTATC
TGGAAAAATCCACGATATTAAAGTTGCAATGCGTGAAATTACATTGACACCAACAAAACATGCAAACGGTAGAGTTGAAG
AGAATTTCCCTGTTACGGTTTATGATACAGGTGGCGCTTACACAGATGATACTGCTGTAATTGATGTGAAGAAAGGATTG
CCGCGTTTGCGTGAGCAATGGATTTTAGATCGTGGAGATGTAGAGGAATTAACAGACGTAAGTTCTGATTACGGAAAAGA
ACGTAAAAACGATGAGAAATTAGATGAATTGCGTTTCGAACACATTAGTAAACCATTGCGTGCGAAAGCTGGGATGAATG
TTTCTCAGTTATACTATGCAAAACAAGGAATCATTACTCCAGAAATGGAATACATCGCCATTCGTGAAAACCAACGATTT
GATGAGTTGAAACTGCAATTGAATGGACAATATGAAGCCTTGACTGCTCAGCATGAAGGTGAAAGTTTTGGAGCGAATAC
ACCAAAAGGGTTTATTACTCCGGAGTTTGTTCGGGATGAAATCGCTGCTGGACGTGCAATTATTCCGAATAATATCAATC
ACCCAGAGTCTGAACCAATGATTATTGGTCGTAACTTCTTGGTGAAAATCAATGCAAACATCGGGAACTCGGCTGTTACT
TCGTCTATTGAGGAAGAAGTAGAAAAAGCAGTATGGGCTTGCCGCTGGGGAGCAGATACGATTATGGATTTGTCAACAGG
TAAAAATATTCACGAAACGCGCGAGTGGATTATTCGCAATTCGCCAGTTCCAATTGGTACCGTTCCAATTTACCAAGCTT
TGGAAAAAGTGAACGGAGTTGCTGAAGATTTGACGTGGGAGATTTTCCGTGATACATTGATTGAACAAGCGGAGCAAGGA
GTTTCTTACTTCACCATTCACGCAGGAGTTTTGTTGCGTTACATTCCACTGACAGCAAAACGTGTTACAGGGATCGTTTC
TCGTGGTGGTTCTATCATGGCGAAATGGTGCTTGTCTCACCACAAAGAAAATTTCTTATACACACACTTCGAAGATATTT
GTGAAATCATGAAAGCGTATGACGTAGCATTCTCATTGGGAGATGGTTTGCGTCCGGGATCTTTGGCAGATGCAAATGAT
GCAGCTCAATTTGGTGAATTAGAAACCTTGGGCGAATTGACGAAAATTGCTTGGAAACATGATATTCAAGTCATGATTGA
AGGTCCAGGTCACGTTCCAATGCACATGATTAAAGAAAATATGGACAAACAGTTGAAAGAATGTAACGATGCACCTTTCT
ACACACTTGGACCATTGACGACGGATATCGCTCCAGGTTATGACCACATTACATCTGCAATTGGTGCGGCAATGATTGGT
TGGTTTGGAACAGCTATGTTGTGTTACGTTACTCCGAAAGAACACCTTGGTTTACCAAATCGCAAAGATGTGAAAGATGG
AGTTATCACGTATAAATTGGCTGCTCATGCTGCCGATTTGGCAAAAGGACATCCAGGTTCTCAGTACCGTGACAATGCAT
TGAGTAAAGCACGTTTTGAATTCCGTTGGGAAGATCAGTTCAACTTGTCTTTGGATCCAGATACCGCTCGTGAATTCCAC
GATGAAACATTGCCTGCAGAAGGTGCAAAAGTTGCCCACTTCTGTTCGATGTGCGGACCGAAATTCTGCTCCATGAAAAT
CACACAAGATATTCGTGATGCTGCTGAATCAGGAATGTTTGAGAAATCGGAAGAATTTAAGACAAAAGGAAGTCAAATTT
ATTCATAA

Protein sequence :
MKKSDQTPKEGSLTIGAISGSKKVYVSGKIHDIKVAMREITLTPTKHANGRVEENFPVTVYDTGGAYTDDTAVIDVKKGL
PRLREQWILDRGDVEELTDVSSDYGKERKNDEKLDELRFEHISKPLRAKAGMNVSQLYYAKQGIITPEMEYIAIRENQRF
DELKLQLNGQYEALTAQHEGESFGANTPKGFITPEFVRDEIAAGRAIIPNNINHPESEPMIIGRNFLVKINANIGNSAVT
SSIEEEVEKAVWACRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQG
VSYFTIHAGVLLRYIPLTAKRVTGIVSRGGSIMAKWCLSHHKENFLYTHFEDICEIMKAYDVAFSLGDGLRPGSLADAND
AAQFGELETLGELTKIAWKHDIQVMIEGPGHVPMHMIKENMDKQLKECNDAPFYTLGPLTTDIAPGYDHITSAIGAAMIG
WFGTAMLCYVTPKEHLGLPNRKDVKDGVITYKLAAHAADLAKGHPGSQYRDNALSKARFEFRWEDQFNLSLDPDTAREFH
DETLPAEGAKVAHFCSMCGPKFCSMKITQDIRDAAESGMFEKSEEFKTKGSQIYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 73
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 73
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 72