Gene Information

Name : Fluta_2063 (Fluta_2063)
Accession : YP_004344887.1
Strain : Fluviicola taffensis DSM 16823
Genome accession: NC_015321
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2373411 - 2374712 bp
Length : 1302 bp
Strand : +
Note : COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732:IPR014026:IPR014027:IPR017476; KEGG: pdi:BDI_1308 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-man

DNA sequence :
ATGAGCAACTCAATCTACAATAAATTAATCGCCAAAGAAGCAAAACTAGCCGTTATTGGATTAGGTTATGTCGGCTTGCC
GATTGCTTTGGAATTTGCAAAGAAAATCAAAGTTGTAGGGTTTGATATCAATCAAGCACGTGTTGATTTAATGCGCAATA
AGAAAGATCCAAGCAACGAGTTAGATGCTACTGCTTTTGAAAATTGTGATATTCATTTCACCGCCGATTTGGAAGATTTA
AAAGACGTTCAGTTTTTTATTGTAGCCGTTCCAACTCCTATTGACGATGCCAATTTGCCCGACTTAAAACCCTTGCTGGG
TGCATCAAGAAGTGTTGCTCAAGCACTTAAAAAAGGCGATTACGTTGTTTTCGAATCTACAGTTTATCCAGGTTGTACTG
AAGAAGATTGCATTCCAGTTTTGGAAGAACTTTCAGGATTAACATTCATGGAAGATTTCAAAGTAGGTTATTCACCAGAG
CGTATCAATCCAGGAGACAAAGAACACACGCTTCAAAATGTGGTGAAAGTTGTTTCTGGTTGTGGTGCAGAATCACTTGA
GGAAATTGCAAAAACCTATGAATTAGTAGTTGATGCGGGCGTTCATCGGGCGGCTTCAATCAAAGTTGCTGAAGCTGCTA
AGATTATTGAAAATACGCAACGTGACGTAAATATTGCCTTGATCAATGAATTATCAATCATCTTTAACCGCTTGGGAATA
AATACCTATGATGTGCTTGAAGCTGCTGGTACAAAATGGAATTTCTTGCGTTTTTCACCCGGTTTAGTCGGTGGACACTG
CATTGGTGTTGATCCGTATTATTTGACACACAAAGCTCAACAAGCAGGATATCACGCAAAAATCATTAACAGTGGTCGTT
ATGTGAATGATTCAATGGGATTCTACATTGGAAAGCAAACCACCAAAAAAATAATTGCTCAAGGAAAACACATTCAAGAT
GCGAAGGTTTTGGTCATGGGAGCAACCTTTAAAGAAGATGTGTCCGATATTCGAAATTCCAAAGTGATTGATGTAGTGAA
TGAATTAAAATCATTCCAAGTAAAAGTAGATTTAGTGGACCCACACGCGTCTTCTGAGGAAATGGAACACGAATACGGCG
TTTCATTGGTGGAAATTGGAAAAGATTACGATGCAATTATCGTAGCTGTAAATCACAGAGATTATAAAAACCTAGATGAA
ACCTACTTCAAGTCTTTGATGAAAGATGGCCAAGGAGTTTTTGTAGATATTAAAGGAATTTATAAAGGAAAAATTAATGA
TTTAGAATACTGGAGTTTGTAA

Protein sequence :
MSNSIYNKLIAKEAKLAVIGLGYVGLPIALEFAKKIKVVGFDINQARVDLMRNKKDPSNELDATAFENCDIHFTADLEDL
KDVQFFIVAVPTPIDDANLPDLKPLLGASRSVAQALKKGDYVVFESTVYPGCTEEDCIPVLEELSGLTFMEDFKVGYSPE
RINPGDKEHTLQNVVKVVSGCGAESLEEIAKTYELVVDAGVHRAASIKVAEAAKIIENTQRDVNIALINELSIIFNRLGI
NTYDVLEAAGTKWNFLRFSPGLVGGHCIGVDPYYLTHKAQQAGYHAKIINSGRYVNDSMGFYIGKQTTKKIIAQGKHIQD
AKVLVMGATFKEDVSDIRNSKVIDVVNELKSFQVKVDLVDPHASSEEMEHEYGVSLVEIGKDYDAIIVAVNHRDYKNLDE
TYFKSLMKDGQGVFVDIKGIYKGKINDLEYWSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-100 53
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-101 53
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-101 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Fluta_2063 YP_004344887.1 nucleotide sugar dehydrogenase VFG0431 Protein 1e-101 53