Gene Information

Name : Fluta_0183 (Fluta_0183)
Accession : YP_004343030.1
Strain : Fluviicola taffensis DSM 16823
Genome accession: NC_015321
Putative virulence/resistance : Unknown
Product : single-strand-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 188613 - 189062 bp
Length : 450 bp
Strand : +
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: aat:D11S_0456 single-stranded DNA-binding protein (ssb) (helix-destabilizingprotein); PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding

DNA sequence :
ATGTCTGGTAGCGTAAATAAAGTCATTTTAATAGGAAACTTAGGGAAAGACCCTGAAGTAAGACGATTGGAAAACGGAGC
TGTTGTGGCTAGTTTCCCGATTGCGACATCTGAAACCTATACCGATAGAACAACAGGAGAGCGCAAAGACAATACCGATT
GGCACAATATTGTGGTTTGGAGAGGATTGGCCGAAGTTGTGGAGAAATATGTGCGAAAAGGTCAGAAAATTTACGTTGAA
GGAAAATTAAAAACACGTTCTTGGACCGATCAAGCTGGTGCAACACGTTATACGACAGAAGTTGTCGCTGATGAATTGAC
CATCCTTACACCAAGAAATGATCAAGATAGACCAGCGAACACCAACAATCCTCCTTATCCAACTGAAGAACCGCAGAATC
AAAGCCCCATGGATTTAGGCATTAGCCCGAATGACGATTTACCCTTTTAA

Protein sequence :
MSGSVNKVILIGNLGKDPEVRRLENGAVVASFPIATSETYTDRTTGERKDNTDWHNIVVWRGLAEVVEKYVRKGQKIYVE
GKLKTRSWTDQAGATRYTTEVVADELTILTPRNDQDRPANTNNPPYPTEEPQNQSPMDLGISPNDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 2e-27 46
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 1e-16 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-16 43
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-16 43
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 7e-15 42
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 3e-16 42
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 9e-17 42
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-16 42
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-16 42
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-14 41
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-14 41