Gene Information

Name : Arcve_0514 (Arcve_0514)
Accession : YP_004341256.1
Strain : Archaeoglobus veneficus SNP6
Genome accession: NC_015320
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 442407 - 443411 bp
Length : 1005 bp
Strand : -
Note : COGs: COG0214 Pyridoxine biosynthesis enzyme; HAMAP: Vitamin B6 biosynthesis protein; InterPro IPR001852; KEGG: afu:AF0508 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; TIGRFAM: Vitamin

DNA sequence :
ATGGAACTTGAAAAGCTCAGATTCGGAACGGAGCTCATAAAGAGAGGATTTGCAAAGATGCAGAAGGGCGGAGTTATAAT
GGATGTCACGAATGCAGAGCAGGCAGGAATTGCTGAAGATGCGGGAGCAGTTGCGGTCATGGCCCTCCACAAGGTTCCGG
CCGATATAAGGCAGGCCGGCGGAGTTGCAAGGATGGCTGACCCCAAGATAATTCAGGAGATAATGGATGCCGTAACGATT
CCCGTCATGGCCAAGGTCAGAATCGGACATGTTGCTGAAGCAAGGGCACTCGAAGCTCTGGGAGTTGACATGATAGACGA
GAGTGAAGTTCTCACGCCAGCAGACGTTTTCTTCCATATAGACAAGCGCAAGTTCGTCGTACCTTTTGTTTGCGGTGCAA
GAAGCCTTGGCGAGGCAGCGAGGAGAATATGGGAAGGGGCAGCAATGATCAGAACCAAGGGCGAGGCTGGAACAGGCAAT
GTTGTCGAGGCGGTCAAACACATGAGACTGATTAACAGGGCGATAGCAGAACTTCAGCAGATGGAGGAGGCAAGGGTGTT
CAGTGTTGCGGAAAAGTATGCTCAGGCATACTGCAGGCTTGCGAGCAGCGTTAGGGAAGAGATGGGATTGTGTGAGATTA
GCAAGAACGACGTGGTTTATGAAGAATGCACTCTCGGCGAGATCGTTGATGGTATATATAAGGTTCTGCTCGAGATTAGA
GAGCTGGGCAGGCTGCCAGTAGTTAATTTCGCCGCTGGTGGCGTTGCGACGCCAGCAGACGCGGCATTCATGATGCAACT
TGGGGCTGATGGCGTGTTCGTTGGCTCGGGCATATTCAAGTCGTCCAACCCTCCAGAATATGCAAAGGCGATTGTTGAAG
CTGTGCAGCACTACGATGAGCCGGAAGTTGTTGCAGAGATTTCAAAGGGATTAGGCGAAGCGATGAAGGGACTCGATGTT
TTCCAGCTCAGCGAGGAAGAAAGGTTGCAGTACAGAGGCCTATGA

Protein sequence :
MELEKLRFGTELIKRGFAKMQKGGVIMDVTNAEQAGIAEDAGAVAVMALHKVPADIRQAGGVARMADPKIIQEIMDAVTI
PVMAKVRIGHVAEARALEALGVDMIDESEVLTPADVFFHIDKRKFVVPFVCGARSLGEAARRIWEGAAMIRTKGEAGTGN
VVEAVKHMRLINRAIAELQQMEEARVFSVAEKYAQAYCRLASSVREEMGLCEISKNDVVYEECTLGEIVDGIYKVLLEIR
ELGRLPVVNFAAGGVATPADAAFMMQLGADGVFVGSGIFKSSNPPEYAKAIVEAVQHYDEPEVVAEISKGLGEAMKGLDV
FQLSEEERLQYRGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-65 56
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-65 56
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-65 56