Gene Information

Name : Hipma_0745 (Hipma_0745)
Accession : YP_004339774.1
Strain : Hippea maritima DSM 10411
Genome accession: NC_015318
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : 3.6.3.4
Position : 739450 - 741549 bp
Length : 2100 bp
Strand : -
Note : COGs: COG2217 Cation transport ATPase; InterProIPR006403; IPR006416; IPR001757; IPR008250; IPR 005834; KEGG: mev:Metev_1829 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Co

DNA sequence :
ATGTCTAAATATAAATGCCCCAAATGCGGCATGGAGTATGATGCACCGGGAAAATGCGAAATGGACGGTGCAGAACTTAT
AAGAGTAGAAAGCAAACCAAATGAAAACATTGACAATCGTACAAAACATCACAGCCATGCGCAGCACCATAAAATGATGG
TAGAAGATTTCAAAAAGAGATTTGTTATATCTACTATAACAACGATACCTATATTAATACTTTCTCCGTTAGTTCAAAAA
ATTTTTGGCATTCATATAAGCTTTTCTGGCAGTGATTATATACTGTGGGCTTTATCAACATTTATTTTCTTCTTTGGTGG
ATGGCCATTCTTAAAGGGATTATACGATGAGTTGACATCAAAAAAGCCCGGTATGATGACGCTCATCGCTCTTGCAATAA
CAACAGCTTACTTCTACAGCAGCCTTGTTATTTTTGGGGTTAAGGGTAAGGTATTCTTCTGGGAACTTGCCACGCTTATA
GATATTATGCTCTTAGGTCACTGGATAGAGATGAAATCCGTTATGGGAGCATCAAATGCATTAGAGGAACTCACAAAACT
TATGCCTGAAAATGCTCATCTTCTCTTAAAAGACGGCTCTATAAAAGAAGTCCCCGTCGGTGAGTTAAAATCAGGCGATA
TAATCCTGGTTAAACCGGGTGAGCAGATACCCTCAGATGGTATAATAACAGAAGGCTCCACATACATAGATGAATCCATG
ATAACAGGTGAAAGCAAACCGGTAAGCAAAGCAAAGAACCACACCGTCATAGGTGGCTCTATCAATATTGACGGTGCAAT
TAAGGTTAAAGTCCAGATGGCGGAAAACGGGTCATTTCTATCACAAATCATTGAACTTGTAAAACAGGCTCAAGAAAGCA
AATCAAAAACACAGGATTTAGCAAACAAAGCAGCATTTTGGCTTACCATTATAGCTCTATCTTCAGGTGCAACTACATTT
TTAGTATGGTTTGGTATTTTTGGCAAAACAGTTGAGTTTGCACTTGAGAGAATGGTTACGGTTATGGTTATAACATGCCC
ACATGCCTTAGGATTGGCCGTTCCTTTGGTTGTTGCGACCTCAACAGCTATAGCAGCAAAAAATGGCCTTTTAATTAAAA
ATAGAGCCTCTTTTGAGATGGCAAGAAATCTGCAGGCTGTAGTGTTTGACAAAACTGGGACACTTACAAAGGGCAGTTTT
GATATAACTGATATAGTAATCTTCAAGAATAACATAACAAAAGAGAAACTACTTGAATATGCTGCTGCTTTAGAGAGCTA
TTCAGAACATCCTATAGCCCAAACAATAGCCAAAAAATTAACACAAAAAGTGAATGTAAAAGATTTTAAATCTATTCCCG
GAAAAGGCGTTGAAGGAATAATAGACAACAAACGCATAATGGTCGTGAGCCACAACTACCTCAAAGAGAAAAACATAACA
ATTGACAAAAAACTCATAAAAAACCTTATTGAATCAGGGAAAACAGTTGTTTATGTTTTGATAGATAATGTTTTATCAGG
AGCCTTGGCGTTGGCTGATGTAATAAGAGAAGAATCAAAAGAAGCCATATCAAAACTGAAGTCCATGGGTATAAAATGCA
TAATGTTAACTGGTGACAGAAAAGAGGTTGCAAAATGGGTCTCAGAAAATGTTGGTATAGATGAATACTTTGCAGAGGTA
TTACCGAATGAAAAATCCCAAAAAATAAAAGAAATAAAGAATAGAGGGCTCATTGTTGCAATGACTGGTGATGGTATAAA
CGACGCCCCTGCATTAACAGAAGCCGATGTAGGTATAGCAATAGGGGCTGGGACAGATATTGCCGTTGAATCAGCCGATA
TTGTCCTTGTTAGAAACGATCCAAGGGATGTTGTTGCTATAGTGCATCTTGCAAAAGCAACTTACAAAAAAATGGTTCAA
AATCTAATGTGGGCAACAGGTTACAATGCACTGGCTATCCCTCTCGCAGCAGGTGTTCTGTATAACTACGGGATACTCTT
ATCTCCTGCTATTGGAGCGGTTTTAATGTCTTTAAGCACTGTAATTGTTGCAATAAACGCAAAATTATTAAAAAACAAAG
CCTACACTTTTGACAAGTAA

Protein sequence :
MSKYKCPKCGMEYDAPGKCEMDGAELIRVESKPNENIDNRTKHHSHAQHHKMMVEDFKKRFVISTITTIPILILSPLVQK
IFGIHISFSGSDYILWALSTFIFFFGGWPFLKGLYDELTSKKPGMMTLIALAITTAYFYSSLVIFGVKGKVFFWELATLI
DIMLLGHWIEMKSVMGASNALEELTKLMPENAHLLLKDGSIKEVPVGELKSGDIILVKPGEQIPSDGIITEGSTYIDESM
ITGESKPVSKAKNHTVIGGSINIDGAIKVKVQMAENGSFLSQIIELVKQAQESKSKTQDLANKAAFWLTIIALSSGATTF
LVWFGIFGKTVEFALERMVTVMVITCPHALGLAVPLVVATSTAIAAKNGLLIKNRASFEMARNLQAVVFDKTGTLTKGSF
DITDIVIFKNNITKEKLLEYAAALESYSEHPIAQTIAKKLTQKVNVKDFKSIPGKGVEGIIDNKRIMVVSHNYLKEKNIT
IDKKLIKNLIESGKTVVYVLIDNVLSGALALADVIREESKEAISKLKSMGIKCIMLTGDRKEVAKWVSENVGIDEYFAEV
LPNEKSQKIKEIKNRGLIVAMTGDGINDAPALTEADVGIAIGAGTDIAVESADIVLVRNDPRDVVAIVHLAKATYKKMVQ
NLMWATGYNALAIPLAAGVLYNYGILLSPAIGAVLMSLSTVIVAINAKLLKNKAYTFDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 4e-104 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hipma_0745 YP_004339774.1 copper-translocating P-type ATPase BAC0629 Protein 0.0 63
Hipma_0745 YP_004339774.1 copper-translocating P-type ATPase BAC0079 Protein 6e-132 45
Hipma_0745 YP_004339774.1 copper-translocating P-type ATPase BAC0383 Protein 2e-111 41