Gene Information

Name : Hipma_0623 (Hipma_0623)
Accession : YP_004339652.1
Strain : Hippea maritima DSM 10411
Genome accession: NC_015318
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 628775 - 630187 bp
Length : 1413 bp
Strand : -
Note : COGs: COG0174 Glutamine synthetase; InterPro IPR004809; IPR008147; IPR008146; KEGG: ddf:DEFDS_1474 glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutami

DNA sequence : 
ATGACTCCAGAGGAGTTGGTAAAAAAGATTCAGGAAGAAGACATTAAACTGGTAGATGTGAGGTTTGTCGACCTATTAGG
CACCTGGCAGCACTTTACAGTACCGGCACATGTAATAACTGAAGAGGTCTTTGAAGAGGGTTTAGGTTTTGATGGCTCAT
CAATAAGAGGATGGAAAAGCATAAACGAAAGTGACATGCTAGTAATTCCCGATGCTGCAACGGCTTTTGTCGACCCATTT
ACGGAGGTAAACACACTCAATATCATTTGCGATATAGTAGACCCAATAACCAAAGAGCCATACCAAAGGCATCCAAGGGC
TATTGCAAAGAAAGCTGAGGAGTATCTAAAATCCACAGGAATAGCTGATATAGCTTTCTTTGGACCTGAGCTTGAGTTTT
TTATTTTTGACGATGTAAGATTTGATGTTAAATCAAATACATCATACTATTCAGTTGATTCTATCGAGGGTATATGGAAT
TCAGGTAAAGATGAAGACCCAAATCTAGGTTACAAAATAAGACACAAAGAAGGATATTTCCCTGTTCCACCAGCGGATAC
ATTACAGGATCTAAGGAGCGAAATAGTACTCGAGCTTGAAAAAGCCGGTATAGAAGTTGAGGCGCACCACCACGAGGTTG
CAACGGCAGGCCAAGCAGAGATAGACATAAAGTATGCACCGCTTCTACAGCAAGCAGACAACGTAATGAAATACAAATAC
TTAGCAAAAAACGTAGCATCTATGTATGGAAAAACTATAACATTCATGCCAAAACCTTTAGCTGGAGACAACGGAACGGG
TATGCACACACACCAGAGTTTATGGAAAGATGGAAAACCACTATTTGCAGGCAACGGCTATGCTGGATTGAGCGAGATAG
GTCTTTATTATATAGGTGGAATACTTAAACATGGTAAAGCTTTGGCAGCATTCACAAACCCAACAACGATATCATACAAA
AGACTAATACCAGGCTTTGAAGCCCCAATTAACCTTGCATACTCATCAAGAAACAGATCTGCAGCAATAAGAATACCAAT
GTATTCACCATCACCAAAGGCAAAAAGAATAGAGGTAAGGTTCCCTGATCCAACAGCCAACCCATACTTAGCATTTACAG
CTATGCTTATGGCAGGATTGGATGGAATTATAAACAAGATAGACCCAGGTGAGCCATTAGATAAAAACATTTATGATTTA
CCACCCGAGGAGCTTGCAAGGGTGAATAAAATGCCTGCAAGCCTTGAGGAAGCATTAAACGAGCTTGAAAAGGATTATGA
ATTCTTACTAAGAGGCGATGTATTCACAGAGGATTTAATAAAAACTTGGATAGATTACAAACGCGAAAATGAAATTAAAT
ACGTAAACTCCATTCCACATCCAGCTGAGTTTTACCTATATTTTGACGTATAA

Protein sequence : 
MTPEELVKKIQEEDIKLVDVRFVDLLGTWQHFTVPAHVITEEVFEEGLGFDGSSIRGWKSINESDMLVIPDAATAFVDPF
TEVNTLNIICDIVDPITKEPYQRHPRAIAKKAEEYLKSTGIADIAFFGPELEFFIFDDVRFDVKSNTSYYSVDSIEGIWN
SGKDEDPNLGYKIRHKEGYFPVPPADTLQDLRSEIVLELEKAGIEVEAHHHEVATAGQAEIDIKYAPLLQQADNVMKYKY
LAKNVASMYGKTITFMPKPLAGDNGTGMHTHQSLWKDGKPLFAGNGYAGLSEIGLYYIGGILKHGKALAAFTNPTTISYK
RLIPGFEAPINLAYSSRNRSAAIRIPMYSPSPKAKRIEVRFPDPTANPYLAFTAMLMAGLDGIINKIDPGEPLDKNIYDL
PPEELARVNKMPASLEEALNELEKDYEFLLRGDVFTEDLIKTWIDYKRENEIKYVNSIPHPAEFYLYFDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Hipma_0623 YP_004339652.1 glutamine synthetase VFG1399 Protein 1e-131 58