|
Name : Hipma_0522 (Hipma_0522) Accession : YP_004339552.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 523397 - 524365 bp Length : 969 bp Strand : + Note : COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644; IPR001347; IPR004800; KEGG: ddf:DEFDS_1039 arabinose-5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosp DNA sequence : ATGAATAAAGTATTGAATGCAATAAAAAGAGCTGTTGATATAGAGGCCAACAGTATTATTTCTTTAAGCAAAAGAATAGA TAGCTCTTTTCTTGAGGCTGTTGAGTTGATTGATGGTTGTGAGGGTAGGGTAATTTTTTCTGGTATTGGAAAGTCGGGCC TTGTAGCAAAGAAGATATCATCAACATTTTCAAGTATAGGCATACCTTCTATGTTTGTTCATCCAGCTGAAGCAGCACAC GGTGACTTAGGCATGATAAGAAAAGATGATGTAGCTATACTCCTATCCAACTCAGGCTCTACACCGGAGGTGCTGTTTTT GCTTCCCATGCTTAAGCGTTTTGGTTTGAAAATTATATCTATTGTGGGAAATGTAAACTCAGAGCTTGCAAAAAGGAGCG ATGTTGTCTTAGATTCATCAGTTGAACAAGAAGCGACCTCTGTTAGTTTGGTTCCTACATCTTCGACAACAACAGCGCTT GTTATAGGGGATGCATTAGCCGCTGGTTTAATCGTAAAAAGAGATTTCAAGGAAGAGGATTTTGCATTTTTACACCCTGG AGGTGCTATCGGTAAGAAATTGCTTGTTAGAGTTGAGGATTTGATGCATTCTGGAGGTGATGTGCCTGTTGTTGGTAAGG ATGAATCATTTGAAAAGCTTATCTATGAGATTTCATCAAAAAGACTTGGCATGACGACAGTTGTAAATGACAAAGGAGAA CTTATAGGCGTTATAACAGATGGGGATTTAAGAAGGGCTATAGAAAAATACAAAGACAGCTTATTTAAAATAAAAGCTAA AGATATAATGAATAAAAATCCAAAAACAATAGATAGATTCTCCTTGGCTGCAAAGGCTGCAAATATAATGGAGAGCTATT CAATTACAAGTTTGGTTGTAATTGAAGATAACGGTAGAATTGAAGGTGTTATTCATATGCATGACATACTAAAAGCTGGG GTTTTATAA Protein sequence : MNKVLNAIKRAVDIEANSIISLSKRIDSSFLEAVELIDGCEGRVIFSGIGKSGLVAKKISSTFSSIGIPSMFVHPAEAAH GDLGMIRKDDVAILLSNSGSTPEVLFLLPMLKRFGLKIISIVGNVNSELAKRSDVVLDSSVEQEATSVSLVPTSSTTTAL VIGDALAAGLIVKRDFKEEDFAFLHPGGAIGKKLLVRVEDLMHSGGDVPVVGKDESFEKLIYEISSKRLGMTTVVNDKGE LIGVITDGDLRRAIEKYKDSLFKIKAKDIMNKNPKTIDRFSLAAKAANIMESYSITSLVVIEDNGRIEGVIHMHDILKAG VL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-51 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 3e-51 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-51 | 43 |
