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Name : Hipma_0476 (Hipma_0476) Accession : YP_004339507.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Virulence Product : type IV-A pilus assembly ATPase PilB Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 479786 - 481483 bp Length : 1698 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831; IPR001482; IPR013374; IPR013369; KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; PFAM: Type II secretion system protein E; General se DNA sequence : ATGACAACTTTATTAGGCCAACTTTTATTATGGAATAATGTTATAACTCAACAGCAACTTGATGAAGCCTTAGAGGAACA GAAAAAAAGCAAAAAAAAGCTTGGGACTATACTTATAGAAAAGGGATTCGTAGATGAAAAAATACTGAATGATTTTTTAA GCAAACAATACGGTGTAGAAAGTGTAGACCTAAATTCTATAGATATATCGAAAGACGTAATAAAAAAAGTTCCGCCTCAA ATAGCAAAAAAGTATACATTAATACCTGTAGCTATAGAAAAAAACAAGATAAAAGTAGCCATATCAGACCCAACAAATAT ATTTGCTTTAGATGAAGTAAGATTCGTCACAGGCATGAATGTTATTCCATTGTTTTCAAACGAACGCTCAATTTTAAGGG CTATAGACAAATATTATGGAACATCAACAGAACTTGAAGAAATTGCAGATGAAATAGCAGAATTTTCATCTGATGTAAAC GTAATAAAGGAAGAGGAAGAGGCCGAAGATGTAAAAGATTTAGAAAGGTCTGCAGAAGATGAACCCATTATAAAACTTGC CAATACAATACTATCAAGAGCTGTAGTAAGCGGGGCAAGCGATATACACATAGAGCCTTACGAAAATGAACTAAGAATAA GATATAGAATAGACGGTAAATTAAAAACAATCATGACATTCGCAAGAAGTATGGCTCCAAAGCTAACATCACGCATCAAG ATTATGTCAAAACTAAACATAGCAGAAAAAAGATTACCACAAGACGGTAGAATAAGAATAAAAGTTTCAGGAAAAGACAT AGATCTCCGTGTATCCACGCTTCCTACGGTATACGGCGAAAAGGTTGTTATGAGAATATTAGACAGAAGTAATGTACGAG TCGACTTAGAAAAATTAGGATTCGAAGATGATGATTTAACGAGATACCTAAAAGCCATACAAAAACCATACGGAATGATA TTGGTAACAGGCCCAACAGGAAGTGGAAAATCCACAACTCTATATGCTTCTTTAAACAAGATAAATAAAGATGATGTCAA TATAATGACCGTTGAAGACCCGGTTGAATACAACCTTGACGGAATAAATCAAGTTCATGTAAAAGAGGATATAGGCTTAA CATTTGCATCTGCGTTAAGATCGTTCCTACGCCAAGATCCAGATATAATAATGGTCGGTGAAATAAGGGATTCAGAAACA GCAGAGATAGCAATAAGGGCTGCCTTAACAGGACATTTGGTCTTCTCTACCCTCCATACCAACGATGCTCCCTCCACAGT AATGAGGCTTGTTGATATGGGAATAGAGCGTTACCTCATAGCATCTTCCTTGATCTTGGTTTTAGCCCAAAGGCTCGTAA GAAAGATATGCCCATATTGCAAAAAGCAATTAGATGTACCCCCTGAAGCTTTGGAGGAAATAGGGTTTTCGAAGGAGGAA GCAAAAACTGTAAAGGTGTATAAAGGCGAAGGATGTGATTATTGCAACGAAACCGGATACAAAGGTAGAGTAGCTTTGTA TGAGGTCATGCCAATTTCAGAAAAAATTAGAAGAATGATACTAGAGAGTGCAAGTGTTGAGGAAATAAGAAAACAAGCTA TCGAAGAAGGAATGGCAACCTTAAGGATGAGTGGACTTAAAAAGATTAAAGAGGGTGTAACAACCATTGAAGAGGTAATG AACGTAACTTTTAACTAA Protein sequence : MTTLLGQLLLWNNVITQQQLDEALEEQKKSKKKLGTILIEKGFVDEKILNDFLSKQYGVESVDLNSIDISKDVIKKVPPQ IAKKYTLIPVAIEKNKIKVAISDPTNIFALDEVRFVTGMNVIPLFSNERSILRAIDKYYGTSTELEEIADEIAEFSSDVN VIKEEEEAEDVKDLERSAEDEPIIKLANTILSRAVVSGASDIHIEPYENELRIRYRIDGKLKTIMTFARSMAPKLTSRIK IMSKLNIAEKRLPQDGRIRIKVSGKDIDLRVSTLPTVYGEKVVMRILDRSNVRVDLEKLGFEDDDLTRYLKAIQKPYGMI LVTGPTGSGKSTTLYASLNKINKDDVNIMTVEDPVEYNLDGINQVHVKEDIGLTFASALRSFLRQDPDIIMVGEIRDSET AEIAIRAALTGHLVFSTLHTNDAPSTVMRLVDMGIERYLIASSLILVLAQRLVRKICPYCKKQLDVPPEALEEIGFSKEE AKTVKVYKGEGCDYCNETGYKGRVALYEVMPISEKIRRMILESASVEEIRKQAIEEGMATLRMSGLKKIKEGVTTIEEVM NVTFN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-93 | 49 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-93 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hipma_0476 | YP_004339507.1 | type IV-A pilus assembly ATPase PilB | VFG2048 | Protein | 9e-95 | 49 |
| Hipma_0476 | YP_004339507.1 | type IV-A pilus assembly ATPase PilB | VFG1880 | Protein | 3e-105 | 47 |
| Hipma_0476 | YP_004339507.1 | type IV-A pilus assembly ATPase PilB | VFG0182 | Protein | 1e-96 | 47 |
| Hipma_0476 | YP_004339507.1 | type IV-A pilus assembly ATPase PilB | VFG0112 | Protein | 2e-109 | 44 |
| Hipma_0476 | YP_004339507.1 | type IV-A pilus assembly ATPase PilB | VFG1876 | Protein | 2e-93 | 44 |
