Gene Information

Name : Hipma_1583 (Hipma_1583)
Accession : YP_004340597.1
Strain : Hippea maritima DSM 10411
Genome accession: NC_015318
Putative virulence/resistance : Unknown
Product : ssDNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1558442 - 1558840 bp
Length : 399 bp
Strand : -
Note : COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424; IPR011344; KEGG: caa:Caka_1586 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-bind

DNA sequence :
ATGGCAAATCTGAATAAAGTGATGCTTATAGGTAATCTCACCAGAGACCCAGAGCTCAGATACACACCGGCTGGTTTAGG
TGTTGCAAGTTTTGGTATAGCGGTCAATACGCCTGTAGGCAAAGATGAGCAAGGCAATAGGAAGACAGAAACACTCTTTG
TTGATGTCGTGGCTTTTGGTAGGCAGGCAGAAACAATAGCCGAATACCTTAAAAAAGGATCGCTGGTTTATATCGAAGGA
AGATTGCGCTACAGAAGCTGGGAAGATGCAAATGGAAATAGAAGGTCAAAACACGAGATAGTTCTTAATAATTTTCAATT
TTTGTCCTTTAAAGATAAAACAGAAGCCGCTCAAGATGTGGTTGATGTACCTGCTGAGGATGAAGATATACCATTTTAA

Protein sequence :
MANLNKVMLIGNLTRDPELRYTPAGLGVASFGIAVNTPVGKDEQGNRKTETLFVDVVAFGRQAETIAEYLKKGSLVYIEG
RLRYRSWEDANGNRRSKHEIVLNNFQFLSFKDKTEAAQDVVDVPAEDEDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 5e-18 46
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 7e-18 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 6e-18 45
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 8e-17 45
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 3e-18 43
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 5e-17 42
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-18 42
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-18 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-18 42
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 3e-18 42
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 5e-18 41