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Name : Hipma_1184 (Hipma_1184) Accession : YP_004340205.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0691 EC number : - Position : 1178534 - 1178980 bp Length : 447 bp Strand : - Note : COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: tjr:TherJR_2690 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-bind DNA sequence : ATGAGAGAGATAGTTAATCGCAAGGCCCGCCATGATTATGAAATCTTAGAAACTTACGAGGCGGGCCTTGAGCTTAAAGG CAGTGAAGTTAAATCCATAAGAATGGGTTCTGCTAATCTAAAAGATAGCTATGCTGAAATAAAAAATGGTGAAATATGGG TAAATAATTTTCACATAAGCCCATATAAGTTTGCATCTGCTCATACAAATCATGACCCTTATAGAAAAAAAAAGCTCCTT CTTCATAAATACCAAATAAGAAGACTTATAGGCAAGGTAAAAGAGAAAGGCCTTACGCTTATACCTTTAAAGGTTTATTC TAAAAATGGCAAGATAAAAATGGAGCTTGCCCTTGCTAAAGGTAAGAAGCTCTTTGACAAGAGGAAAGATATTAAAGAAA GGGATCTAACCAGAGAGGCTGAGCGAGAATTGGCCCGTTTTAAATAA Protein sequence : MREIVNRKARHDYEILETYEAGLELKGSEVKSIRMGSANLKDSYAEIKNGEIWVNNFHISPYKFASAHTNHDPYRKKKLL LHKYQIRRLIGKVKEKGLTLIPLKVYSKNGKIKMELALAKGKKLFDKRKDIKERDLTREAERELARFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 9e-31 | 54 |
| smpB | YP_001800894.1 | SsrA-binding protein | Not tested | Not named | Protein | 1e-29 | 53 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 1e-23 | 43 |
