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Name : Hipma_1129 (Hipma_1129) Accession : YP_004340154.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1124761 - 1126437 bp Length : 1677 bp Strand : + Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593; IPR007831; IPR001482; KEGG: ddf:DEFDS_1256 type IV pilus assembly protein PilB; PFAM: Type II secretion system protein E; General secretory sys DNA sequence : ATGAAACTAAAAAAAATTAGAATTGGTGATTTGCTTAAAGAGAAAGGCTATATAACAGAAGCCCAATTGAAAGTTGCCCT AAATGAGGCAAAAAGTAAGGGTAAAAAGCTCGGTGAAATGCTTGTTGAGCTTGGTTATATAACTGAAGAATTAATGACGG ATGTTTTGGCTGAGCAACTTGGAATAGAAAAAGCAACATTAGAGGACATAAAGTTTGAAAAGCCTTTAAAAGAGGCGCTA CCCGAGAAACTCGCCAGAAGGTTTAAGGTGGTGCCTGTTGATGTCAAGGACAACAAACTTATTATAGCCACAAGCGACCC CACTGACATTTTCGCGCTTGATGAAATTAGCAGAATAACACACAAAGAAATCATCCCTACAATAATATCCAAAGATGAGC TATTCAGCGCTCTTGAGAGAATCTATGGAACAGAGGACAAATTATATAAAATAGTAGATGACGTTGAGAAAAAGATAATC TCAAGCGGAAGCGATGAGGATATATTAAGAAACTTAGCAGAAGACGCATCCGTTGTAAACTTAGTAGACAGTATAATAGC CAAAGCACTGACAGATAAAGCCAGCGACATACACATAGAACCTGATGAGGATATCCTAAGGGTCAGGTATAGGATCGATG GAATACTACATGAGGTTTTATCTCTAAACAAAGTGCTTCATCCCGCCGTAATATCAAGAATAAAAATAATGTCAAATATG AATATAGCAGAAAAAAGGTTACCTCAAGATGGAAGGTTTAAGCTAAGAAAAAATTTCAAGGATGTAGATTTTAGGGTTTC TACTCTCCCTACAAACTACGGCGAGAAGGTTGTTTTAAGGATCTTAGACAGAGAAAAGGCTCTGCTCGATTTAAGAAACA TAGGAATGGATGAGTACAGCTTAAAAATATACGAAGATATGATATCAAAACCTTATGGCATTATCTTAATTTCTGGTCCT ACCGGCTCAGGAAAGACAACAACCCTCTATGCATCGTTAAACAAACTCAATACACCAGAGAAAAATATTATAACAGTAGA GGATCCAATTGAATATAATTTTAAACTAATAAATCAGGTAAGCGTCGATGAAACCGCTGGACTGACTTTTGCTAATGCAT TAAGGAGCATCTTAAGGCAAGACCCGGACATTATTATGATTGGTGAGATCAGGGATAAAGATACAGCAGAAATTGCCATT CAGGCATCACTTACGGGACATTTGGTTTTATCCACAATACACACAAACGATGCAGCATCAAGCGCTGTAAGGCTCATTGA AATGGGTATTGAGAATTACCTTGTTTCAACCTCCTTGATCGGCGTTGTGGGTCAGAGGCTTGTTAGAAAGATATGTCCGC ATTGTAAGGTTTCATATAAGCCAGAAAAGGAGCTTATTGAAAGATTGGGGCTTGATAATGACATCGTCTTATACAAAGGA GAAGGTTGCGAAAAGTGTAAGTTCAGCGGATATCAGGGCAGAATTGGCATTTATGAGGTGATGAAAATAGATAGAGATAT AAGAAGCCTTATAAACAAGAATGCCCCAATTGATGAGATTAGGCAAAAAGCCAAAGAAAACGGTATGCGCTTTATGAGGG ATAGCGGTCTTGAACTTGTAAAAAAAGGTGTAACAACGCTTGAGGAGGTCTTAAGAGCAACAATTGTCAAAGAGTAA Protein sequence : MKLKKIRIGDLLKEKGYITEAQLKVALNEAKSKGKKLGEMLVELGYITEELMTDVLAEQLGIEKATLEDIKFEKPLKEAL PEKLARRFKVVPVDVKDNKLIIATSDPTDIFALDEISRITHKEIIPTIISKDELFSALERIYGTEDKLYKIVDDVEKKII SSGSDEDILRNLAEDASVVNLVDSIIAKALTDKASDIHIEPDEDILRVRYRIDGILHEVLSLNKVLHPAVISRIKIMSNM NIAEKRLPQDGRFKLRKNFKDVDFRVSTLPTNYGEKVVLRILDREKALLDLRNIGMDEYSLKIYEDMISKPYGIILISGP TGSGKTTTLYASLNKLNTPEKNIITVEDPIEYNFKLINQVSVDETAGLTFANALRSILRQDPDIIMIGEIRDKDTAEIAI QASLTGHLVLSTIHTNDAASSAVRLIEMGIENYLVSTSLIGVVGQRLVRKICPHCKVSYKPEKELIERLGLDNDIVLYKG EGCEKCKFSGYQGRIGIYEVMKIDRDIRSLINKNAPIDEIRQKAKENGMRFMRDSGLELVKKGVTTLEEVLRATIVKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-87 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-88 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG0182 | Protein | 6e-98 | 50 |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG1876 | Protein | 7e-94 | 45 |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG2048 | Protein | 2e-89 | 45 |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG1880 | Protein | 3e-85 | 44 |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG0112 | Protein | 1e-89 | 41 |
| Hipma_1129 | YP_004340154.1 | type II secretion system protein E | VFG0233 | Protein | 2e-82 | 41 |
