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Name : Hipma_1120 (Hipma_1120) Accession : YP_004340145.1 Strain : Hippea maritima DSM 10411 Genome accession: NC_015318 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1109251 - 1110510 bp Length : 1260 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase, class IIa; InterPro IPR002317; IPR015866; IPR002314; KEGG: tye:THEYE_A0018 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synth DNA sequence : GTGTTAGATTTAAACATCTTAAGAAAAACACCTGAGATTCTTAGAGAAAACTTAAAGAAGAGGCTTGCAAAGATAGATGT TGATGAGCTGATCGAATTGGACAAAAGGGTAAGGCAAAAAAAGGCTGAGCTGGATGAGCTTTTATCCAAAAGAAATTCGC TATCAAAAGAGATAGGCAAAAGAAAGGCAAAAAAGGAAGCCGCAGACGACCTTATAGAAAGCGTAAATCAGATATTAAAA CAGCTTGAGGCTGTTGAGGATGAATACAAAAAGCTCCATAAGGATTTTATGGACAGATGGTTGCTTGTGCCAAACATATT GGACGATGATGTTCCATCCGGTGCGGATGAAAATGACAATGTGGAGATAAGAAGATGGGGTGAGCCGCCTCAATTCAGCT TCAAACCAAAAGAGCATTTCGAGATAGCAGAGAAACTCGGTATATTGGATTTTGAAAGAGCCTCCAAGCTGTCGGGTTCA CGCTTTGCTGTGTATAAAGGGGATGGTGCAAAACTCGAAAGAGCCCTAATAAACTTTATGCTTGATCTACACACGCAAAA ACATAGATATAAAGAGATCATACCGCCATATATTGTAAATTACGATGTAATGGTGGGAACGGGTCAGTTTCCTAAATTTA TCGAGGAGGCATACGAAACCAGCGGGCAGTATCTGATACCGACAGCTGAGGTGCCTCTTGTAAATCTACACAGGGAGGAG ATGCTAAGCGAGGATGAACTGCCAATAAAATATGTGGCATATACGGCATGTTTTAGAAAAGAAGCTGGGAGTTATGGTAA GGATGTCAAAGGCATTATAAGGCAACATCAATTCAACAAGGTTGAGCTTGTGCAATTTACAAAGCCCGAGGAGTCGGATA AGGCGCTTGAGGTGCTTACTAAGGATGCCGAAGAGGTTTTAAGATTGCTTGGGCTTCCTTATAGGGTTGTTGTCTTATGC AGTGGGGATATAGGTTTTTCTGCTGCTAAGACTTACGATATCGAGGTGTGGCTGCCGGGTCAAAACAGATACAGGGAAAT CTCCTCATGTTCAAATACAAGGGATTTTCAGGCAAGAAGGGCATCGATAAAATTCAAGGATAAAAACAAAAAGAAGCAGT TTGTCCACACGCTTAACGGCTCGGGCGTTGCTGTTGGAAGGTGTTTGGTTGCAATATTGGAGAACTATCAACAAAAAGAT GGCTCTGTTAAGATCCCAGAGGCACTTGTGCCCTATTTTGGAAAAGAGAAGATTGGATAA Protein sequence : MLDLNILRKTPEILRENLKKRLAKIDVDELIELDKRVRQKKAELDELLSKRNSLSKEIGKRKAKKEAADDLIESVNQILK QLEAVEDEYKKLHKDFMDRWLLVPNILDDDVPSGADENDNVEIRRWGEPPQFSFKPKEHFEIAEKLGILDFERASKLSGS RFAVYKGDGAKLERALINFMLDLHTQKHRYKEIIPPYIVNYDVMVGTGQFPKFIEEAYETSGQYLIPTAEVPLVNLHREE MLSEDELPIKYVAYTACFRKEAGSYGKDVKGIIRQHQFNKVELVQFTKPEESDKALEVLTKDAEEVLRLLGLPYRVVVLC SGDIGFSAAKTYDIEVWLPGQNRYREISSCSNTRDFQARRASIKFKDKNKKKQFVHTLNGSGVAVGRCLVAILENYQQKD GSVKIPEALVPYFGKEKIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-96 | 52 |
