|
Name : Psed_0089 (Psed_0089) Accession : YP_004330219.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Resistance Product : SSS sodium solute transporter superfamily protein Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 102650 - 104287 bp Length : 1638 bp Strand : + Note : KEGG: amd:AMED_1584 solute:Na+ symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter DNA sequence : ATGACCTCCACGCTGGCCCAGTCGGGTGGCGCCACCGTCGGCAGCCCGTGGCTCAACATCGCCATCTTCGGATTGTTCGT CGTCGTCACCCTCGTCGTCGTGTTCCGCGTGGGCCGGTCGAACTCGACGGCGTCGGACTACTACGCCGCCGGTCGCTCGT TGACCGCCGCGCAGAACGGGACCGCGATCTCGGGCGACTACCTCTCGGCGGCGTCGTTCCTCGGCATCGCGGGCGCCATC GCCGTCTACGGCTACGACGGTTTCCTGTACTCGATCGGCTTCCTCGTCGCGTGGCTCGTGGCGCTGCTGCTGGTCGCGGA ACTGCTGCGCAACACCGGCCGCTACACGATGGGCGACGTCCTGGCGTTCCGGATGCGGCAACGCCCGGTCCGGGCGGCCG CGGCGACGTCGACGCTCGTCGTGTCGTTCTTCTACCTGCTGGCCCAGATGGCCGGCGCGGGCGGGCTCGTCGCGCTGCTC ATCGGGGTGACGGGAAAGGCGCAGCAGGCACTCGTCATCGCGGTCGTCGGCGTGCTGATGATCGTGTACGTGCTGGTCGG CGGCATGAAGGGCACCACCTACGTCCAGATCATCAAGGCGGTGCTGCTCATCGCGGGCGCCGCGGTGATGACGATCTGGG TGCTGGGGCTGACGGGATTCAACCTGTCGACGCTGCTCGGCGACGCCGTCGCGAACAGCCCCAAGAACGGCGAGGCCATC CTCGGCCCAGGCCTGCAGTACAAGAACAAGGTCGACCTGATCTCGCTGGGGCTCGCGCTGGTCCTCGGCACCGCGGGTCT GCCGCACATCCTGATGCGCTTCTACACGGTGCCCTCGGCCCGGGAGGCGCGGAAGTCGGTCGTCTGGTCGATCTGGCTGA TCGGCATCTTCTACCTGTTCACGCTCGTGCTCGGCTACGGCGCGGCGTGGCTGGTCGGACCCGCGGTGATCAGCGACCCC AACACGCCGGGCGGGACGAACTCCGCCGCCCCGCTGCTGGCCTACGAACTGGGCGGGCCGTTCCTGCTGGGGTTGATCTC CGCCGTCGCCTTCGCGACGATCCTCGCCGTCGTCGCCGGCCTGACGATCACGGCGTCGGCGTCGTTCGCCCACGACGTGT ACGCCAACATCGTCAAGAAGGGACAGGCGACCTCGCGCGACGAGGTCCGCGTCGCCCGGATCACCGCCGTCGTCATCGGG ATCGTCGCGATCGGCGGCGGCATCCTGGCGAACGGGCAGAACATCGCCTTCCTCGTGGCGCTCGCGTTCGCCGTCGCGGC CTCGGCGAACCTGCCGACGATCCTGTACTCGCTCTACTGGAAGCGGTTCAACACGACCGGCGCGCTCTTCAGCATCTACG GCGGGCTCGCGATCTGCATCGTGCTGATCGTCTTCTCGCCCGCCGTCTCGGGCAAGCCGCCGAACGCCGCCGGCCGGTCG GCATCGATGCTGCAGGGCGTGGACTTCCACTGGTTCCCGCTGGACAACCCCGGCCTCGTGTCCATCCCGGCGTCGTTCCT GCTCGGCGTCATCGGCACCTACGTCGGCAGCCGGGAGAAGCACAACGCCGAGAAGTACGCCGAGATGGAGGTCCGGTCGC TCACCGGAGCGGGCTCGGAGAAGGCAGTCGAGCACTGA Protein sequence : MTSTLAQSGGATVGSPWLNIAIFGLFVVVTLVVVFRVGRSNSTASDYYAAGRSLTAAQNGTAISGDYLSAASFLGIAGAI AVYGYDGFLYSIGFLVAWLVALLLVAELLRNTGRYTMGDVLAFRMRQRPVRAAAATSTLVVSFFYLLAQMAGAGGLVALL IGVTGKAQQALVIAVVGVLMIVYVLVGGMKGTTYVQIIKAVLLIAGAAVMTIWVLGLTGFNLSTLLGDAVANSPKNGEAI LGPGLQYKNKVDLISLGLALVLGTAGLPHILMRFYTVPSAREARKSVVWSIWLIGIFYLFTLVLGYGAAWLVGPAVISDP NTPGGTNSAAPLLAYELGGPFLLGLISAVAFATILAVVAGLTITASASFAHDVYANIVKKGQATSRDEVRVARITAVVIG IVAIGGGILANGQNIAFLVALAFAVAASANLPTILYSLYWKRFNTTGALFSIYGGLAICIVLIVFSPAVSGKPPNAAGRS ASMLQGVDFHWFPLDNPGLVSIPASFLLGVIGTYVGSREKHNAEKYAEMEVRSLTGAGSEKAVEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 3e-88 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_0089 | YP_004330219.1 | SSS sodium solute transporter superfamily protein | BAC0564 | Protein | 7e-46 | 45 |
