Gene Information

Name : Psed_0865 (Psed_0865)
Accession : YP_004330972.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 918904 - 920181 bp
Length : 1278 bp
Strand : -
Note : PFAM: Transposase, mutator type; KEGG: rha:RHA1_ro08487 transposase mutator family protein

DNA sequence :
ATGACCGACACGATCGAGCCCATGCCGCGGGCTCGGATTGATCACCAGCAGTTCGCTCAGCAGTTGGTGGAGGCCGCCAA
GGCCGACGGGGTGGAGCTCGTCGGCCCGGACGGGCTGCTCACCGGGCTGACCAAAACAGTGCTCGAGACCGCCCTGGAAG
CCGAGCTCAGCGAGCACCTGGGCTATGACCGCCACGACCCGGCCGGGCGCGACGGCGGGAACTCCCGCAACGGCACCCGC
ACCAAGACCGTGCTCACCGAGATCGGCCCGGTCGAGATCGAGGTGCCGCGCGACCGCGACGCCAGCTTCGAGCCTCAGAT
CGTGCGCAAGCGCCAACGCCGCCTGGACGGGATCGACGAGATCGTGCTGTCGCTGACCGCCCGCGGCCTGACCACCGGGG
AGGTGGCCGCGCACTTCGCCGAGGTCTACGGGGCCAAGGTCTCCAAGGACACCATCTCGAGGATCACCGACAAGGTCCTC
GACGAGCTGGGCGAGTGGCAGAACCGCCCGCTCGACGCCGTCTATCCGGTGCTGTTCATCGACGCTCTCTACGTCAAAGT
CCGCGACGGGCAGGTCACCAACCGGCCCTTCTACGTGGTCATCGGGGTGACCGTGGACGGGCAGCGCGACATCCTCGGGA
TCTGGGCCGGCGAGGGCGGCACCGGTGGGGAGGGCGCGAAGTTCTGGCTGCAGGTTCTGACCGAGATCAAAAACCGCGGG
GTCGGCGATGTGTGCATCGCCGTCTGCGACGGCCTGAAGGGCCTGCCCGAGGCGATCACCACCGCCTGGCCGCAGGCGGT
GGTGCAGACGTGTGTGTTGCACCTGATCCGCAACACCTTCCGCTACGCCTCCCGGCGCTACTGGGAGCAGCTGGCCAAGG
ACCTGCGCCCGGTCTACACCGCCCCGACCGAGGCCGCGGCCCAGGCCCGGTTCGCCGAGTTCGCCGAGACCTGGGGCGGG
CAGTATCCGGCGATCATCGCGCTGTGGCGGGCGGCGTGGTCGGAGTTCGTGCCGTTCCTGGACTACGACGTGGAGATCCG
CAAGGTCATCTGCTCCACGAATGCGATCGAGTCGCTCAACGCCCGCTACCGGCGGGCGATCAAGGCCCGGGGGCACTTCC
CGACCGAGCAGGCCGCGCTGAAGTGCCTCTACCTGGTCACCCGCTCACTCGACCCCACCGGGAAGGGCCGAACCCGCTGG
GCGATGCGCTGGAAGCCGGCCCTGAACGCCTTCGCGATCACCTTCGCCGGCCGTATCGTCCCCAGCAACGGAAACTAG

Protein sequence :
MTDTIEPMPRARIDHQQFAQQLVEAAKADGVELVGPDGLLTGLTKTVLETALEAELSEHLGYDRHDPAGRDGGNSRNGTR
TKTVLTEIGPVEIEVPRDRDASFEPQIVRKRQRRLDGIDEIVLSLTARGLTTGEVAAHFAEVYGAKVSKDTISRITDKVL
DELGEWQNRPLDAVYPVLFIDALYVKVRDGQVTNRPFYVVIGVTVDGQRDILGIWAGEGGTGGEGAKFWLQVLTEIKNRG
VGDVCIAVCDGLKGLPEAITTAWPQAVVQTCVLHLIRNTFRYASRRYWEQLAKDLRPVYTAPTEAAAQARFAEFAETWGG
QYPAIIALWRAAWSEFVPFLDYDVEIRKVICSTNAIESLNARYRRAIKARGHFPTEQAALKCLYLVTRSLDPTGKGRTRW
AMRWKPALNAFAITFAGRIVPSNGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-75 44
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 7e-72 43
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 1e-69 42
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 7e-67 41