Gene Information

Name : Psed_0772 (Psed_0772)
Accession : YP_004330884.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 824145 - 825059 bp
Length : 915 bp
Strand : -
Note : PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: msm:MSMEG_1895 HTH-type transcriptional regulator AlsR

DNA sequence :
GTGGAGCTGCGGCGAATCCAGTACTTCGTCGCCGTCGCGGAGGAGGCACACTTCGGGCGCGCCGCGGAGCGGCTGCAGAT
GGCGCAGCCGCCGCTGTCCCAGCAGATCAAGGCGCTCGAGGCCGAGATGGGCGTGACGCTGTTCCGGCGCACCACCCGCA
AGGTCGAGATCACGCCGGCGGGCGAGCGGTTCCTGAAGCGGGCGCGAGAGATCCTCGCCGCGGTCGACGACGCGGTGACC
GAGGCCGAGCAGGTCGCCCGCGGCCTGCTCGGCCGGATCGCCATCGGGTTCACCGGATCGGCGACCTACGACCTGCTCCC
GTCGCTGGTCCGGGTCCTGCGGGCGGACCTGCCCGGCATCGAGCTCGACGTCTACGGCGAGATGCTCACGCCGCGCCAGG
TGCTCGCGCTGGAGGACGGCACGCTGGATCTCGCGCTGCTGCGTCCTCCCGTCCGCAGCTCCGCGATCGACGTGCGCATC
CTGCGCCGCGAGCCGTTGATCGCCGTCCTGCCCGCCCAGCACCCGTTGGCGGACAAGGGGCCCGTGCGGCTCGCCGACCT
GGCCGACGACACGTTCATCACCTACCCGTCCCACAACCGGTCCGTCGTGTACGAGGCGGTGATCGACGCGTGCCAGCACG
CCGGGTTCGTCCCCGCCGCGATGCACGAGGTCGCCGAGACCTCGACCCTGGTCTCGTTCGTCGCGGCCGGGCTCGGCGTC
GCGCTCGTCCCGGCCTCCGTTCGGCACCTGCAGATCACCGGGGCGTGCTATCTGCCGCTCGCCGGCACGACCCGGGAGGT
GGAGCTGGCTCTCGCGACGCGTGTGAACGAGCCGTCCCCGCTCGTGGCCCGCGTCCCCGCCCGTGCGGAGGCCTTCATCG
GCGGTGGCCGGAAGGTGAAGACCCCGCGTCATTGA

Protein sequence :
MELRRIQYFVAVAEEAHFGRAAERLQMAQPPLSQQIKALEAEMGVTLFRRTTRKVEITPAGERFLKRAREILAAVDDAVT
EAEQVARGLLGRIAIGFTGSATYDLLPSLVRVLRADLPGIELDVYGEMLTPRQVLALEDGTLDLALLRPPVRSSAIDVRI
LRREPLIAVLPAQHPLADKGPVRLADLADDTFITYPSHNRSVVYEAVIDACQHAGFVPAAMHEVAETSTLVSFVAAGLGV
ALVPASVRHLQITGACYLPLAGTTREVELALATRVNEPSPLVARVPARAEAFIGGGRKVKTPRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
stmR AAK97547.1 StmR Not tested SPI-6 Protein 1e-39 41