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Name : Psed_6517 (Psed_6517) Accession : YP_004336459.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : urease subunit alpha Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0804 EC number : 3.5.1.5 Position : 6897822 - 6899534 bp Length : 1713 bp Strand : + Note : PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease, alpha subunit; KEGG: amd:AMED_8448 urease alpha subunit DNA sequence : ATGACGGCCATCGACCGGGCCCGCTATGCAGACCTGTTCGGCCCGACGACGGGCGACCGCATCCGGCTGGCCGACACGAA CCTGCTGATCGAGGTGACCGAGGACCGCAGCCGTGGGCCGGCCTCGGGCGACGAGGTGATCTTCGGCGGCGGCAAGGTCA TCCGCGAGTCCATGGGTCAGTCCACGGTGACCTCGGCCGAGGGCGCCCCCGACCTGGTCATCACCGGCGCGGTGGTCCTG GACCACTGGGGCGTCGTCAAGGCGGACGTCGGCATCACCGACGGGCGCATCACCGGGATCGGCAAGGCGGGCAACCCGGA CACCATGGACGGCGTGGACTTCCCCATCGGGCCGTCCACGGAGATCATCGCCGGGAACGGCAAGATCCTCACCGCGGGTG GGATCGACGTCCACGTCCACTTCATCACTCCGGGGCTCGTCGACACCGCGCTCGCCGCGGGGCTCACGACGCTGGGCGGC GGCGGCACCGGGCCCGCCGAGGGCACGAAGGCCACGACCGTCACGCCCGGGCCGCGCAACCTCGCGCGGATGTTCCAGGC GCTCGACCACCTGCCGGTCAACGTCCTGCTGATGGGCAAGGGCAACACGACCAGCACCGACGCGCTCTGGGAGCAGCTGC GGGCGGGCGCGGGCGGGTTCAAGCTGCACGAGGACTGGGGGACGACCCCGGCGGCGATCGACGCGTGCCTGCGCGTCGCG GACGCGTCCGGCGTACAGGTCGCCATCCACACCGACACCCTCAACGAGGCCGGTTTCCTGGAGTCGACGGTCGAGGCGAT CGCCGGCCGCTCGATCAACGCGTTCCACACCGAGGGCGCCGGCGGCGGGCACGCGCCGGACATCATCGAGGTCGTCGGGA CGGGGAACATCCTGCCCAGCTCGACGAACCCGACCCGGCCGCACACCGTCAACACGCTCGACGAGCACCTCGACATGCTG ATGGTCTGCCACCACCTCAACCCGTCGGTACCCGAGGACCTGGCGTTCGCCGAGAGCCGCATCAGGCCGACGACGATCGC CGCCGAGGACGTGCTGCACGACATCGGCGCGATCTCGATGATGAGCTCGGACTCGCAGGCCATGGGCCGCATCGGCGAGG TCGTCATCCGCACCTGGCAGACCGCGCACGTCATGAAGGCGGCCCGCGGCGCGCTGCCCGGCGACGGGCAGGCCGACAAC CTGCGGGCGCGGCGCTACGTCGCGAAGTACACGATCAACCCGGCGATCGCGCACGGCATGGGCGAGGAGATCGGGTCGGT CGAGGTCGGCAAGCTCGCCGACCTCGTGTTGTGGGACCCGAAGTTCTTCGGCATCCGCCCCGACCTCGTGCTCAAGGGCG GGTTCATCGCGTGGGCCGCGATGGGCGACGCCAACGCGTCGATCCCGACCCCGCAGCCGGTGCTGGCCCGGCCGATGTTC GGCGCGGCACCGGCGGTCGCGGCGGCGACGAGCCTGAACTTCGTCGCCCCCGCGGCGCTGGAGGCGCGGTCGCTGGAGTC GCTCGGCCTCGCGAAGCCGGCCGCGCCGGTCGCGGACACCCGGTCGGTGACCAAGGCCCACATGCTGCTCAACGACGCGA CCCCCTCGGTGAAGGTCGATCCCGACTCCTTCGAGGTGCGGATCGACGGCGACGTCGTCGAGCCCGCCCCGGTGTCCGAG CTGCCGATGGCCCAGCGCTACTTCCTGTTCTGA Protein sequence : MTAIDRARYADLFGPTTGDRIRLADTNLLIEVTEDRSRGPASGDEVIFGGGKVIRESMGQSTVTSAEGAPDLVITGAVVL DHWGVVKADVGITDGRITGIGKAGNPDTMDGVDFPIGPSTEIIAGNGKILTAGGIDVHVHFITPGLVDTALAAGLTTLGG GGTGPAEGTKATTVTPGPRNLARMFQALDHLPVNVLLMGKGNTTSTDALWEQLRAGAGGFKLHEDWGTTPAAIDACLRVA DASGVQVAIHTDTLNEAGFLESTVEAIAGRSINAFHTEGAGGGHAPDIIEVVGTGNILPSSTNPTRPHTVNTLDEHLDML MVCHHLNPSVPEDLAFAESRIRPTTIAAEDVLHDIGAISMMSSDSQAMGRIGEVVIRTWQTAHVMKAARGALPGDGQADN LRARRYVAKYTINPAIAHGMGEEIGSVEVGKLADLVLWDPKFFGIRPDLVLKGGFIAWAAMGDANASIPTPQPVLARPMF GAAPAVAAATSLNFVAPAALEARSLESLGLAKPAAPVADTRSVTKAHMLLNDATPSVKVDPDSFEVRIDGDVVEPAPVSE LPMAQRYFLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ureC | NP_286680.1 | urease subunit alpha | Virulence | TAI | Protein | 2e-155 | 61 |
| ureC | NP_287088.1 | urease subunit alpha | Not tested | TAI | Protein | 2e-155 | 61 |
| ureC | YP_005684266.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-150 | 58 |
| ureC | YP_005682174.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-150 | 58 |
| ureC | YP_003784325.1 | urease subunit alpha | Not tested | PiCp 7 | Protein | 2e-150 | 58 |
| ureC | YP_005686358.1 | Urease alpha subunit | Not tested | PiCp 7 | Protein | 2e-150 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_6517 | YP_004336459.1 | urease subunit alpha | VFG0270 | Protein | 5e-136 | 56 |
