Gene Information

Name : Psed_0612 (Psed_0612)
Accession : YP_004330728.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Unknown
Product : major facilitator superfamily protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2814
EC number : -
Position : 666122 - 667615 bp
Length : 1494 bp
Strand : +
Note : PFAM: Major facilitator superfamily MFS-1; KEGG: sen:SACE_0642 major facilitator superfamily multidrug resistance protein

DNA sequence :
GTGCCCGGGCTCGGGAACGATCAGGCGCGTTCGTGTCAGTCTGGCCGGGTGATCGTGCCCGGCCCCGAGGAGACCTCCCG
GCGCAGCTCCGGTCCGGAGCCCGCCACCCGCGACCTGCGGACGCCGCCGTCGGGCGGGGATCCGGCCGGCCCGACCGATC
GGTTGCGCACCAACGGGTCCGAACCGCCGACCCGCCGGCTCGCGCCCGGGCCGACGCGGCGACTCGGTGCGGTCGTGCGG
GCCGTCCTCGCCGACACGACGCCGCTGCGCACGCCCGCCTACCGGCGGCTCTGGGGCGCGGGCGTCATCACCGTCATCGG
CGCGCAGCTGTCGGTGGTCGCCGTGCCGACGCAGATCTACCAGCTGACGGGATCGTCGGCCTACGTCGGCCTGACGGGTC
TGTTCGGCCTCGTGCCGCTCGTCCTGTTCGGGCTGTGGGGCGGCGCGATCGCCGACGTCATGGACCGGCGGATCCTGTTG
CTGCTCACCGGGGCCGGCATCGCGGCGACGTCGCTGGCGCTGTGGGTCACCTCGGCGACCGGCGTCGGCAACGTCTGGGT
GGTGCTGACGCTGTTCGCGGTGCAGTCGGCGATGCTCGCGATGAACCAGCCCACCCGCAACGCCGTCATCCCACGGCTGA
TCCCGGCCGACGAGCTGCCCGCGGCCAACGCGCTGAACATGACGGTCTTCCAGCTCGGCGCCGTCGTCGGGCCGCTGCTG
GCCGGTGTGCTGATCCCGGTCGTCGGGCTCTCGACGCTCTACCTGATCGACGCGTGCGCCCTGCTCGCGACGCTGTGGGC
GACGTGGATGCTGCCGCCCGTCCCGCCGGGCGAGGTCGGCACGCGGCGCCGGGCCGGCCTGCGCAACGTCCTCGAAGGCT
TCCGCTACGTCTCGACGAAGAAGGTGCTGCTGGTCTCGTTCCTCGTCGACCTGGTCGCGATGGGGTTCGGGATGCCCCGC
GTGGTGTTCCCCGAGATGGCGGAGAAGACCTTCGGCGACCCGCCCGGCGGCGGTATCGCGCTCGGCCTGCTGTTCGCGGC
GATCCCGGTCGGGATGGTCGCCGCGGGGCTGTTCTCCGGCTGGCTGCAACGGATCCGCCGCCAGGGCATGGCGGTGACGT
TCGCGGTGATCGTCTGGGGCGTCGGGGTGGCGCTGTTCGGGCTGACGAGCTCGCTGTGGCTCGCCGTCGTGCTGCTCGCC
GTCGCGGGCGGGGGCGACCTGATCAGCTCGGTCTACCGGAACTCGATGTTGCAGTCGGTCGCGACCGACGAGATGCGCGG
CCGGATGCAGGGCGTGTTCATCGTCGTCGTGGCGGGCGGTCCGCGGCTCGCCGACCTCTGGCACGGGTCCGCCGCGGCGG
CCGTCGGCCCTGGTCCGGCGGCCACCATCGGCGGCGTGGCCGTCGTCGTCGGGGTCGTGGTCGTCGTGCTCATGTTCCGG
GAGTTCTGGACATATCGGGGTCCCGTCGCGGGCTCGTCCACGACCGCGGAGTGA

Protein sequence :
MPGLGNDQARSCQSGRVIVPGPEETSRRSSGPEPATRDLRTPPSGGDPAGPTDRLRTNGSEPPTRRLAPGPTRRLGAVVR
AVLADTTPLRTPAYRRLWGAGVITVIGAQLSVVAVPTQIYQLTGSSAYVGLTGLFGLVPLVLFGLWGGAIADVMDRRILL
LLTGAGIAATSLALWVTSATGVGNVWVVLTLFAVQSAMLAMNQPTRNAVIPRLIPADELPAANALNMTVFQLGAVVGPLL
AGVLIPVVGLSTLYLIDACALLATLWATWMLPPVPPGEVGTRRRAGLRNVLEGFRYVSTKKVLLVSFLVDLVAMGFGMPR
VVFPEMAEKTFGDPPGGGIALGLLFAAIPVGMVAAGLFSGWLQRIRRQGMAVTFAVIVWGVGVALFGLTSSLWLAVVLLA
VAGGGDLISSVYRNSMLQSVATDEMRGRMQGVFIVVVAGGPRLADLWHGSAAAAVGPGPAATIGGVAVVVGVVVVVLMFR
EFWTYRGPVAGSSTTAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1483 YP_001800877.1 hypothetical protein Not tested Not named Protein 3e-57 51