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Name : Psed_6168 (Psed_6168) Accession : YP_004336123.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : phosphomethylpyrimidine synthase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 6527116 - 6528810 bp Length : 1695 bp Strand : + Note : TIGRFAM: Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; KEGG: svi:Svir_34570 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC DNA sequence : ATGACGCAGGACAGCTCCGTCCGGCCGCAGGTCACCACCGGCCCGATCACCGGATCGCACAAGGCGTACCTGCACGGGCC GCGGGGGATGCGGATTCCCGTGCGGCGCATCGCGTTGACCACGGGCGAGTCCCTCGACGTCTACGACACCTCGGGTCCGT ACACCCACGACGCGGCCACCGCCGCCGCCCCGGCGGTCGACCTGCACGCCGGGCTGCCGGCACTGCGGGCGGACTGGATC GCCGAGCGGGAGCCGATCGGCGGCGCGGTCACCCAGCTCGCCTACGCGCGCGCCGGGATCGTCACGCCCGAGATGGAGTT CGTCGCGGTCCGCGAGGGAGTCGACGCGGAGCTGGTGCGGTCGGAGGTGGCCCGTGGGCGCGCGGTGATCCCGGCCAACC GGCGCCATCCCGAGACCGAACCGATGATCATCGGAAATCGGTTCCTGGTGAAGGTCAACGCCAACATCGGCAACTCGGCG GTGCGGTCGTCGATCGAGGACGAGGTCGAGAAACTGGTGTGGGCCACCCGGTGGGGCGCCGACACCGTCATGGATCTCTC GACCGGGTCGGACATCCACCGGACACGGGAGTGGATCCTGCGCAACTCGCCCGTGCCGGTCGGCACCGTGCCGATCTACC AGGCACTGGAGAAGGTGAACGGCGATCCGGCCGCGCTGAGCTGGGAGGTCTACCGCGACACGGTGATCGAGCAGTGTGAG CAGGGTGTCGACTACATGACCGTGCACGCGGGCGTCCTGCTGCGGTACGTGCCGCTCACCGCCGCGCGGGTCACCGGGAT CGTCTCCCGCGGTGGGTCGATCATGGCTGCCTGGTGCCTGGCCCACCACCGCGAGTCGTTCCTGTACACGCACTTCGCCG AGCTGTGCGCGATCCTGCGCGCCTACGACGTGACGTTCTCCCTCGGCGACGGTCTGCGTCCGGGCTCGATCGCCGACGCG AACGACGAGGCCCAGCTGGCCGAGCTGCGCACCCTCGGCGAGCTGACGGCGATCGCGCGCGAACACGACGTCCAGGTCAT GGTCGAGGGGCCCGGGCACGTGCCGATGAACAAGATCGTCGAGAACGTCGAGCTGGCCCGGCAGTGGTGCGACGAGGCGC CGTTCTACACCCTGGGCCCGCTGACCACCGACATCGCACCGGGCTACGACCACATCACCTCGGCGATCGGCGCCGCGCGG ATCGCGCAGGCAGGCACGGCGATGCTCTGCTACGTCACGCCCAAGGAACACCTCGGGCTCCCCGACCGTGACGACGTCAA GACCGGCGTGATCAGCTACCGGATCGCCGCGCACGCCGCCGACCTGGCGAAGGGGCACCCGCAGGCCCAGGCCCGCGACG ATGCGCTCTCCCGGGCCCGGTTCGAGTTCCGCTGGCACGACCAGTTCGCCCTCGCCCTGGACCCGGACACCGCGCGGTCG TTCCACGACGAGACCCTGCCGGCGGAGGCGGCGAAGTCCGCGCACTTCTGCTCGATGTGCGGACCGAAGTTCTGCTCCAT GCGCATCAGCCACGACATCCGCGACCGGACCGGGGCCGCCGGCCCGGCCGGTGCGGAGGCCGTCGAGGCGGGGATGCGGC AGAAGGCCAGGGAGTTCGCGGACGCCGGTGGGCGGGTGTACCTGCCGGTGACCTCCGCCGGGCCGAGCACGACCGATCCG GCATCGACACCGTGA Protein sequence : MTQDSSVRPQVTTGPITGSHKAYLHGPRGMRIPVRRIALTTGESLDVYDTSGPYTHDAATAAAPAVDLHAGLPALRADWI AEREPIGGAVTQLAYARAGIVTPEMEFVAVREGVDAELVRSEVARGRAVIPANRRHPETEPMIIGNRFLVKVNANIGNSA VRSSIEDEVEKLVWATRWGADTVMDLSTGSDIHRTREWILRNSPVPVGTVPIYQALEKVNGDPAALSWEVYRDTVIEQCE QGVDYMTVHAGVLLRYVPLTAARVTGIVSRGGSIMAAWCLAHHRESFLYTHFAELCAILRAYDVTFSLGDGLRPGSIADA NDEAQLAELRTLGELTAIAREHDVQVMVEGPGHVPMNKIVENVELARQWCDEAPFYTLGPLTTDIAPGYDHITSAIGAAR IAQAGTAMLCYVTPKEHLGLPDRDDVKTGVISYRIAAHAADLAKGHPQAQARDDALSRARFEFRWHDQFALALDPDTARS FHDETLPAEAAKSAHFCSMCGPKFCSMRISHDIRDRTGAAGPAGAEAVEAGMRQKAREFADAGGRVYLPVTSAGPSTTDP ASTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 1e-167 | 60 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 1e-167 | 60 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 3e-160 | 58 |
