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Name : Psed_6116 (Psed_6116) Accession : YP_004336071.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 6471818 - 6473320 bp Length : 1503 bp Strand : - Note : PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: gob:Gobs_0637 lysyl-tRNA synthetase DNA sequence : GTGACCGACGAGCACTCCACACCCGCCGACGACGACCTTCCCGAGCAGCTCCGGGTCCGCCGGGCGAAGCGGGCGGAGCT GCTCGAGCAGGGGATCGACCCGTACCCGGTCGAGGTCGGCCGCACGCACACGTTGCGTGAGGTCCGCGACGCGCATCCCG ATCTCGAGCCCGACACCGCGACCGGCGACAAGGTGGCCGTCGCGGGGCGCGTCGTCTTCCAGCGCAACACCGGCAAGCTC TGCTTCGCGACGTTGCGCGAGGGCGACGGCACCGAGCTGCAGGCGATGCTCAGCCTGGCCGACGTCGGGGAGGAGTCGCT GGCGCAGTGGAAGGCGATGGTCGACCTCGGCGACCTCGTGCTCGTCGAGGGGGAGGTCATCACCTCCCGCCGCGGCGAGC TCTCGGTGTCGGCCGACACCTGGCGGATGCTCGCCAAGGCCGTCCGCCCGCTGCCCGTCGCGCACCGCGAGCTCTCGGAG GAGACGCGGGTGCGCCAGCGCTACGTCGACCTCATCATGCGGCCACGGGCCCGCGAGATGGTGCGCGCCCGCTCGACGGT GCTGCGGACGCTGCGGCGGGTCTTCGAGGAGCGCGGCTACATCGAGGTCGAGACGCCGATGCTGCAGGTGCTGCACGGCG GCGCGACGGCCCGTCCGTTCGTGACCCGCTCGAATGCGCTGAGCCAGGATCTCTACCTGCGGATCGCGCCGGAGCTCTAC TTGAAGCGGGCCGTCGTCGGCGGGATCGAGCGCGTGTTCGAGCTGAATCGTGTTTTCCGTAACGAGGGCATCGACTCGAC GCACTCGCCCGAGTTCGCGATGCTGGAGGCCTACCAGGCCTATGCCACCTACGACGACATGGCCGAACTCACGCGTGAGC TGATCCTGGAAAGCGCCAGGGCCGTCTTCGGTTCGACGGTCGTGCGGCGCGCCGACGGTTCCGAGCACGATCTCGGGGTC CCGTGGCGCAGCGTCACGCTTCACGCATCCGTGGCCGAGGCGGTCGGTCGAGAGGTGACCATCGACACCTCTGCCGAAAC TCTGCGTAAGATCGCCGCGGAACACGACGTCGAGTTGAAGGATTCCTGGTCGGCCGGCGAGATCGTCCTGGAACTGTTCG AGAAGCTCGTCGAGCACACGCTCGTGGAACCGACGTTCGTGCGCGACTACCCGGTCGAGGTCCGGCCACTCACCCGGCAG CACCGCGACGACCCGAGGCTCGCCGAGGCCTGGGACCTCATCGTTTTCGGAACGGAGCTGGCCACCGCCTACTCCGAACT CGTCGATCCCGTGGAACAGCGGGAGCGCCTCTACCGGCAGTCGCTGCTGGCGGCGGCGGGCGACCCCGAGGCGATGCAGC TGGACGAGGACTTCCTGCGGGCCATGGAGTACGGCATGCCGCCCACGGGGGGTATGGGGATGGGCGTCGACCGTCTTCTG ATGACGCTCACCGGCCTCGGCATTCGCGAGACGATTCTGTTCCCGCTCGTCCGTTCCGAGTGA Protein sequence : MTDEHSTPADDDLPEQLRVRRAKRAELLEQGIDPYPVEVGRTHTLREVRDAHPDLEPDTATGDKVAVAGRVVFQRNTGKL CFATLREGDGTELQAMLSLADVGEESLAQWKAMVDLGDLVLVEGEVITSRRGELSVSADTWRMLAKAVRPLPVAHRELSE ETRVRQRYVDLIMRPRAREMVRARSTVLRTLRRVFEERGYIEVETPMLQVLHGGATARPFVTRSNALSQDLYLRIAPELY LKRAVVGGIERVFELNRVFRNEGIDSTHSPEFAMLEAYQAYATYDDMAELTRELILESARAVFGSTVVRRADGSEHDLGV PWRSVTLHASVAEAVGREVTIDTSAETLRKIAAEHDVELKDSWSAGEIVLELFEKLVEHTLVEPTFVRDYPVEVRPLTRQ HRDDPRLAEAWDLIVFGTELATAYSELVDPVEQRERLYRQSLLAAAGDPEAMQLDEDFLRAMEYGMPPTGGMGMGVDRLL MTLTGLGIRETILFPLVRSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-137 | 59 |
