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Name : Psed_6113 (Psed_6113) Accession : YP_004336068.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 6467516 - 6470059 bp Length : 2544 bp Strand : - Note : KEGG: sen:SACE_0414 ATP-dependent Clp protease; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core DNA sequence : ATGTTCGAGAGGTTCACCGACCGTGCACGGCGCGTTGTCGTCCTGGCCCAGGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGGACCGAGCACATCCTCCTTGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCAAAGGCGCTCGAGTCGCTCGGGA TCGCTCTGGAGGGTGTCCGCCAGCAGGTCGAGGAGATCATCGGCCAGGGGCAGCAGGCACCGTCGGGGCACATCCCGTTC ACGCCTCGGGCGAAGAAGGTCCTGGAGCTCTCGCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCGGCGCAGGTGCTGGTCAAGCTGGGAGCCGACCTCAACCGGG TCCGGCAGCAGGTTCTCCAGCTGCTGTCCGGCTACCAGGGCAAGGAGCCCGCCGAGGCCTCCGCGGGCCGCGGCGAGGGC ACCCCGTCGTCCTCCCTCGTCCTCGACCAGTTCGGTCGCAACCTCACCCAGCAGGCCCGCGAGGGCAAGCTGGACCCGGT CATCGGCCGGGAGAAGGAGATCGAGCGGGTCATGCAGGTCCTCTCCCGGAGGACCAAGAACAACCCCGTCCTGATCGGCG AGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTGGCCCAGGGCATCGTCAAGGGCGAGGTGCCCGAGACGCTCAAG GACAAGCAGCTCTACACCCTCGACCTGGGATCGCTGGTCGCGGGCTCGCGCTACCGCGGTGACTTCGAGGAGCGCCTGAA GAAGGTGCTCAAGGAGATCCGCACGCGCGGCGACATCATCCTGTTCATCGACGAGATCCACACCCTCGTCGGTGCGGGCG CCGCCGAGGGCGCGATCGACGCGGCGAGCATCCTCAAGCCGATGCTGGCCCGCGGCGAGCTGCAGACGATCGGCGCCACC ACGCTCGACGAGTACCGCAAGTACGTCGAGAAGGACCCCGCGCTGGAGCGCCGCTTCCAGCCGATCCAGGTGGGCGAGCC GAGCGTCACGCACACCATCGAGATCCTCAAGGGCCTTCGCGACCGCTACGAGGCGCACCACCGGGTCACCATCACCGACC CGGCGCTCGTCGCCGCGGCCACGCTGGCCGACCGCTACATCTCCGACCGCTTCCTGCCCGACAAGGCGATCGACCTGATC GACGAGGCCGGGGCCCGGATGCGCATCCGTCGCATGACGGCGCCGCCGGACCTGCGGGAGTTCGACGAGAAGATCGCCGG CGTGCGTCGCGACAAGGAGTCGGCGATCGACGCGCAGGACTTCGAGCGGGCCGCGTCGCTGCGCGACACCGAGAAGCAGC TGCTCGGGCAGAAGTCGGAGCGCGAGAAGCAGTGGAAGTCGGGTGACCTGGACGTCGTCGCCGAGGTCGACGACGAGCAG ATCGCCGAGGTCCTGGCCAACTGGACCGGCATCCCCGTGTTCAAGCTCACCGAGGAGGAGACCACGCGTCTGCTCCGCAT GGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCCGTCTCCCAGGCGATCCGCCGCACGCGTG CCGGCCTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGTAAGACGGAGCTGTCC AAGGCGCTCGCGAACTTCCTGTTCGGCGAGGACGACGCGCTCATCCAGATCGACATGGGTGAGTTCCACGACCGCTACAC CGCCTCGCGGCTCTTCGGTGCCCCTCCCGGGTACGTGGGCTACGAGGAGGGCGGCCAGCTCACCGAGAAGGTGCGGCGCA AGCCGTTCTCGGTCGTGCTGTTCGACGAGATCGAGAAGGCGCACCAGGAGGTCTACAACACCCTCCTGCAGGTGCTCGAG GACGGCCGGCTCACCGACGGCCAGGGCCGGACGGTGGACTTCAAGAACACCGTCATCATCTTCACCTCGAACCTGGGCAC CCAGGACATCTCGAAGGCGGTCGGGCTCGGCTTCGCGCAGAGCAACGACGAGGCGTCGAACTACGAGCGGATGAAGACGA AGGTCCACGACGAGCTGAAGAAGCACTTCAGGCCGGAGTTCCTCAACCGTATCGACGACATCATCGTGTTCCACCAGCTC ACCGAAGAGCAGATCATCACGATGGTCGACCTCATGATCACGCGCGTCGAGGCGCAGCTGGCGAACAAGGACATGGGCAT CGAGCTCACGCCCGCCGCCAAGTCGCTGCTCGCACGCCGTGGTTTCGACCCCGTGCTGGGCGCCCGGCCGCTGCGCCGGA CCATCCAGCGCGAGATCGAGGACCAGCTGTCCGAGAAGATCCTGTTCGGCGAGGTCGAGCCGGGTCAGATCGTGCTGGTC GACGTCGAGGGCCTCGACCCCGACGCCCCCGAGGGGTCGCGGGCGGCCGACGACAAGGCGCACTTCACCTTCCGTGGTGA GGCCCGCCCGGCGGCGCTCGTTCCCGACGCCCCGCCCGTCGACCTGGCCAAGACCGACGACTGA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGIALEGVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVLQLLSGYQGKEPAEASAGRGEG TPSSSLVLDQFGRNLTQQAREGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQGIVKGEVPETLK DKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDEIHTLVGAGAAEGAIDAASILKPMLARGELQTIGAT TLDEYRKYVEKDPALERRFQPIQVGEPSVTHTIEILKGLRDRYEAHHRVTITDPALVAAATLADRYISDRFLPDKAIDLI DEAGARMRIRRMTAPPDLREFDEKIAGVRRDKESAIDAQDFERAASLRDTEKQLLGQKSEREKQWKSGDLDVVAEVDDEQ IAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELS KALANFLFGEDDALIQIDMGEFHDRYTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEVYNTLLQVLE DGRLTDGQGRTVDFKNTVIIFTSNLGTQDISKAVGLGFAQSNDEASNYERMKTKVHDELKKHFRPEFLNRIDDIIVFHQL TEEQIITMVDLMITRVEAQLANKDMGIELTPAAKSLLARRGFDPVLGARPLRRTIQREIEDQLSEKILFGEVEPGQIVLV DVEGLDPDAPEGSRAADDKAHFTFRGEARPAALVPDAPPVDLAKTDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 80 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_6113 | YP_004336068.1 | ATPase | VFG0079 | Protein | 0.0 | 61 |
| Psed_6113 | YP_004336068.1 | ATPase | VFG0080 | Protein | 1e-146 | 50 |
