|
Name : Psed_6047 (Psed_6047) Accession : YP_004336011.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 6405987 - 6407171 bp Length : 1185 bp Strand : + Note : PFAM: Integrase, catalytic core; KEGG: mtb:TBMG_03231 transposase DNA sequence : ATGGAGCTGCGCGCCCGCGGCTGGAGCATCCAGGCCGCGGCACGGGAGGTCGGCACGTCCCGCACGTCCGGGGCGAACTG GGCCCGCGGCTACAAGACCTACCGCGACGGGCGGGTGGTCGGGTTCGTGGCGCCACTGGATCGCCTCGCCGTGCGCGAGA TCAGCTCGCGCTACTTATCCCAGGACGAGCGTTTCCAGATCGCCGACCTGCGCCGGATGGGCTGGAGCATCCGACGCATA GCCGCCCACCTCGGACGCTCACCCTCGACCATCTCCCGCGAGCTGCGCCGCAACGCACGCAACGACGGCGGCTACCGCCC GTTCGACGCCCACCGCCGGGCCGTGGCCCGCCGAGCCCGCCAGCACCGACGCCGTCTGGACACCAACCACGAGCTGCGAG CCCTCGTTGGAGAGCTACTCGCACAGCGGTGGAGCCCTCAGCAGATCTCCCGTCACCTGCGGGCCCGCTTCCCGGAACTC CCGGGCATGCGTCTGTGTCACGAAAGCATCTACCAGGCGATCTATGAGCCCGGGTCCTCTCTCGTCCGGCCCTCAAGGGT GCCGTCGGTGCATCGATCGCCGCTGCGGACCGGGCGCGATCATCGCCGAGCGCACCAGAAGGTCGAGCGGCGCAGGCCCC GCTTCGCGCAGCCGATGCTGACCATCCACCAGCGCCCGTTCCGACCCGAGGACCGGTCCGAGGCCGGGCACTGGGAGGGC GACCTGATCGTGGGCAAGGACCACGGTTCGGCGATCGGCACCCTGGTCGAGCGCACGACTCGCCTGGTCCGGCTGCTACA CCTTCCTCAGCGTGACGCACACACGCTGCACCGCGTCCTCGCGATGAGGATGGGCGACCTGCCACCGTCGCTGCTGCGCT CGATCACCTGGGACCAGGGCACCGAGATGGCGAGACACACCGACATCACCGCCACCCTCGCGGTCCCCGTCTACTTCTGC GACGCCCACGCGCCCTGGCAGCGGGGATCGAACGAGAACACCAACGGGCTGCTGCGTCAGTACTTCCCTAAGCGGACCGA CCTGAGCATCCACAGCCCGCGGCACCTCAAGGCCGTCGAGAACGAGCTCAACACCCGCCCTCGAATGGTTCTCGCCGACC GCGCTCCCGCCGAGCTGTTCGCTGCGTTGCTAGCCTCTTCGTCCGAGCCATCGTTGCGACGTTGA Protein sequence : MELRARGWSIQAAAREVGTSRTSGANWARGYKTYRDGRVVGFVAPLDRLAVREISSRYLSQDERFQIADLRRMGWSIRRI AAHLGRSPSTISRELRRNARNDGGYRPFDAHRRAVARRARQHRRRLDTNHELRALVGELLAQRWSPQQISRHLRARFPEL PGMRLCHESIYQAIYEPGSSLVRPSRVPSVHRSPLRTGRDHRRAHQKVERRRPRFAQPMLTIHQRPFRPEDRSEAGHWEG DLIVGKDHGSAIGTLVERTTRLVRLLHLPQRDAHTLHRVLAMRMGDLPPSLLRSITWDQGTEMARHTDITATLAVPVYFC DAHAPWQRGSNENTNGLLRQYFPKRTDLSIHSPRHLKAVENELNTRPRMVLADRAPAELFAALLASSSEPSLRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC39292.1 | - | Not tested | LPA | Protein | 2e-36 | 42 |
