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Name : Psed_5946 (Psed_5946) Accession : YP_004335921.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Resistance Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 6302578 - 6303360 bp Length : 783 bp Strand : - Note : KEGG: sen:SACE_3343 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction re DNA sequence : GTGATCGGTAAGCACTTCGTCAGACCCGTCTTACCGACCGGTGACGAGGCCCCGACAGCCGGCACGCGCGGCGCTAGCGT TGGCTTCGTGTGCGCACACGTCCTGGTCGTCGACGACGACGCGACCGTCCGCGACGTCGTCGCCCGTTACCTCGGGGCGG CCGGGCACGACGTCGAGCTCGCCCTCGACGGACCGGGGGCGCTGCGGGCGGCACGGACGACCCCGCCCGACGTCGTCGTC CTGGACCTCATGCTGCCCGGCCTCGGCGGCCTGGAGGTCTGCCGCGCGCTGCGCGCCGACGGTGACCGGCCCCCGATCAT CATGCTCACCGCGCTGGGCGAGGAGGACGACCGGCTGCTCGGCCTGGAGCTGGGCGCCGACGACTACGTGACCAAGCCGT TCAGTCCGCGCGAGCTCGTGCTGCGGGTGGGGTCGATCCTGCGCCGCACGGCCGCGCCCGCGACGGCGCCCGAGCTGGTC GACGGCGGCCTGCGCGTCGACCCGGCCGCCCGGGTCGCGTCGCTGGACGGGCAGCCGCTGGCGCTGACGACCCGCGAGTT CGACCTGCTCGCCTTCCTGCTCGCGCACCCCGGGCAGGCGTTCACCCGCGAGGAGCTGCTGTCCCGGGTGTGGGGCTGGG AGTTCGGCGACCGCTCGACGGTCACCGTCCACGTGCGACGGCTGCGTGAGAAGGTCGAGGCCGACCCGACCGCGCCGCGT CGGATCGCGACGATCTGGGGGACCGGGTACCGCTACGACCGCGGTACGACACCGGGAGGCTGA Protein sequence : MIGKHFVRPVLPTGDEAPTAGTRGASVGFVCAHVLVVDDDATVRDVVARYLGAAGHDVELALDGPGALRAARTTPPDVVV LDLMLPGLGGLEVCRALRADGDRPPIIMLTALGEEDDRLLGLELGADDYVTKPFSPRELVLRVGSILRRTAAPATAPELV DGGLRVDPAARVASLDGQPLALTTREFDLLAFLLAHPGQAFTREELLSRVWGWEFGDRSTVTVHVRRLREKVEADPTAPR RIATIWGTGYRYDRGTTPGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 3e-29 | 45 |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 5e-21 | 42 |
| vanRB | NP_815956.1 | DNA-binding response regulator VanRB | Not tested | Not named | Protein | 4e-23 | 41 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 7e-20 | 41 |
| mprA | YP_005680459.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-21 | 41 |
| mprA | YP_005682550.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-21 | 41 |
| tcsR1 | YP_003782583.1 | two-component system transcriptional regulatory protein | Not tested | PiCp 3 | Protein | 2e-21 | 41 |
| mprA | YP_005684640.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 2e-28 | 48 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_012469.1.7685629. | Protein | 4e-32 | 47 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | HE999704.1.gene2815. | Protein | 3e-34 | 46 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_012469.1.7686381. | Protein | 7e-36 | 45 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | CP001918.1.gene3444. | Protein | 2e-23 | 45 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | CP000647.1.gene2531. | Protein | 3e-23 | 45 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_002952.2859905.p0 | Protein | 2e-35 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | CP001138.1.gene2239. | Protein | 1e-23 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | CP000034.1.gene2186. | Protein | 2e-23 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_002695.1.916589.p | Protein | 2e-23 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | BAC0596 | Protein | 1e-23 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | BAC0039 | Protein | 2e-23 | 44 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_013450.8614421.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_007793.3914279.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_003923.1003749.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_002745.1124361.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_009782.5559369.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_002951.3237708.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_007622.3794472.p0 | Protein | 2e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_002758.1121668.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_009641.5332272.p0 | Protein | 1e-35 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | U35369.1.gene1.p01 | Protein | 2e-23 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | AE016830.1.gene2255. | Protein | 2e-23 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_011595.7057856.p0 | Protein | 1e-27 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_010410.6002989.p0 | Protein | 1e-27 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_010400.5986590.p0 | Protein | 1e-27 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | CP004022.1.gene3215. | Protein | 5e-18 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | BAC0111 | Protein | 7e-26 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | BAC0197 | Protein | 5e-18 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | U82965.2.orf14.gene. | Protein | 2e-13 | 41 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | NC_008702.1.4607594. | Protein | 2e-19 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | VFG1563 | Protein | 2e-29 | 45 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 9e-27 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 3e-25 | 43 |
| Psed_5946 | YP_004335921.1 | winged helix family two component transcriptional regulator | VFG0596 | Protein | 2e-21 | 42 |
