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Name : Psed_5845 (Psed_5845) Accession : YP_004335822.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 6196119 - 6196673 bp Length : 555 bp Strand : + Note : KEGG: mau:Micau_3015 sigma-70 family RNA polymerase; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 DNA sequence : ATGGCACCCCGCCCGACCGACGGCCACGTCACGGACCGCGCCCTCGCCGCCGCGAGGGGCGACCGGGCGGCACTCGACGA GTTCGTCCGGGCCACCCGTGACGACGTGCGCGGGTTCCTGGTGCACCTCGCGGGCGCGGACGAGGCCGACGACCTCCTGC AGGAGACCTACCTGCGCGCGGTCCGGTCGCTGCCGGGCTTCACCGGCGACGGGCCCGCCCGTGCCTGGTTGCTCGCGATC GCCCGGCGCGCGGCCGCCGACGCCGTGCGCGACGCGGTGCGCCGTCCGCGGACCGTCGCGGTCGACGACTGGGAGGCGGT GAACGCCCCGCGCGGCCGGGCGAGCGACGAGGCGGTGCTGGTCGGCGCGTTGGTCGACCGCCTGGAGCCCGACCGTCGCG ACGCGTTCGTCCTCACCCAGCTGCTCGGCCTGGCCTATGCCGACGCGGCGCAGGTCTGCGGCTGCCCGGTGGGCACGATC CGCTCGCGGGTGGCGCGCGCCCGCGAGGACCTGGTGGCCGCGCTCGAACCGGGCCGCACGATCGCCTCGGGATGA Protein sequence : MAPRPTDGHVTDRALAAARGDRAALDEFVRATRDDVRGFLVHLAGADEADDLLQETYLRAVRSLPGFTGDGPARAWLLAI ARRAAADAVRDAVRRPRTVAVDDWEAVNAPRGRASDEAVLVGALVDRLEPDRRDAFVLTQLLGLAYADAAQVCGCPVGTI RSRVARAREDLVAALEPGRTIASG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 7e-14 | 46 |
