|
Name : Psed_5842 (Psed_5842) Accession : YP_004335819.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 6193533 - 6194843 bp Length : 1311 bp Strand : + Note : PFAM: Integrase, catalytic core; KEGG: mpa:MAP3854 hypothetical protein DNA sequence : ATGAGTGTGATCGGTCCGCCGAGGGTGCCGCGGGAACGGGTCCGCCGGTTCTGGAGGGCCCGGTTGGCGGGGGCCACGAT CGCGCAGGCCGCCGCGGAGGTGGGGGTGTCGGCCTCGGCCGGGCGGGGGTGGGTCGTCGAGTCTGGTGGGATGATCCCGG ACCTGACCGAGCCCGGCGGGCGTTATCTGTCCCTGGCCGAACGTGAAGAGATCGCCGTGGGCTGGGCGGCCGGGCACAGC CGGGCCGAGATCGCCCGGCGGCTGGGCCGCCACCGCGCCACCATCGGCCGGGAACTGGCCCGTAACCGCACCGTGCGCTA TCCACGCCGGCCCCCGCTGCCTGACGGGCGCCCGCACCGCCTGGGGCCAGACCCGGGCACGCACGGCGGCCGGGACCGGC CCCAGCACGAACGGCTGCGGTACCGGGCGGTGGTGGCCCAGGCCAAAGCCGAGGCCCGCGCCCGCCGCCGCACACCCGCC AAACTCCTCACCCACCCCGAGCTGGCCGCCCACGTACACACCAGGCTGGTCGAGCAGCAGTGGAGCCCGGAGCAGATCAG TCAGACTCTGCGCCGAGACTTCCCCGACCGGCCGGAGATGTGGGTGTCCCACGAAACCATCTACCAGGGCGTCTACCAGG CCCTCTACGTCCAAGGCCGCGGGCAGCTGCGCCGCGAGCTCGCGGGGTGTCTCCGGACCGGGCGGGCGTTGCGCCGCCCG AACCGGCTGCCCGACCAACGCCAACACCGCAACCAGACCCGGATCCGGGACAAGGTCATGATCTCCCAGCGGCCCGCGGA GGTCACCGACCGGGCCGTGCCCGGGCACTGGGAAGGCGATCTCATCCTCGGCACCGGCAACGAGACCGCGATCGGCACGC TGGTCGAGCGGACCACCCGGTTCGTGTTGCTGCTGCACCTGCCCGGGGGCCACGGCGCAGTCCAGGTCCGGGACGCGATG ATCGCCGCGATGCGGGTGCTGCCCGCGATGGTGCGCCGGTCGTTGACCTGGGACCAGGGCATCGAGCTGGCCCGCCACGC CGAGATCACCATGGCGCCGGAGTTGCCGGTCTATTTCTGCGACCCACACAGCCCCTGGCAGCGGGGCAGCAACGAGAACA CCAACGGGCTGTTGCGCCAGTACTTCCCGAAAAGCACCGATCTGTCCGTGCACACCCACGCCGATCTGGACCGGGTCGCG GACAAGCTCAACTCCCGCCCCCGCAAAACCCTGGACTGGGACACCCCCGGGGAAAGACTGACCCGACTACTGTCGCGGCC AGTAACCACCGGTGTTGCGACCACCCCCTGA Protein sequence : MSVIGPPRVPRERVRRFWRARLAGATIAQAAAEVGVSASAGRGWVVESGGMIPDLTEPGGRYLSLAEREEIAVGWAAGHS RAEIARRLGRHRATIGRELARNRTVRYPRRPPLPDGRPHRLGPDPGTHGGRDRPQHERLRYRAVVAQAKAEARARRRTPA KLLTHPELAAHVHTRLVEQQWSPEQISQTLRRDFPDRPEMWVSHETIYQGVYQALYVQGRGQLRRELAGCLRTGRALRRP NRLPDQRQHRNQTRIRDKVMISQRPAEVTDRAVPGHWEGDLILGTGNETAIGTLVERTTRFVLLLHLPGGHGAVQVRDAM IAAMRVLPAMVRRSLTWDQGIELARHAEITMAPELPVYFCDPHSPWQRGSNENTNGLLRQYFPKSTDLSVHTHADLDRVA DKLNSRPRKTLDWDTPGERLTRLLSRPVTTGVATTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDC7B_2034 | YP_005163475.1 | transposase-like protein | Not tested | Not named | Protein | 2e-65 | 45 |
| DIP0764 | NP_939135.1 | transposase | Not tested | Not named | Protein | 6e-66 | 45 |
| CDC7B_2059 | YP_005163500.1 | transposase-like protein | Not tested | Not named | Protein | 2e-65 | 45 |
