Gene Information

Name : Psed_5703 (Psed_5703)
Accession : YP_004335683.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Resistance
Product : phosphonate-transporting ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.28
Position : 6083020 - 6083760 bp
Length : 741 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: kfl:Kfla_5714 ABC transporter related protein; SMART: ATPase, AAA+ type, core

DNA sequence :
GTGACCGCACCGTCCTGCGCCGAGACCGTCGACCTCGTCAAGGTGCACGGCCGCGGGGGGTCGGCCGTGCGCGCGCTCGA
CGGGGTGTCGCTGCGGATTCCGGAAGGGATGTTCACCGCGGTCATGGGACCGTCGGGGTCCGGCAAGTCGACACTGCTGC
ACTGCCTCGCCGGGCTGGACACCGCGTCGTCGGGGCGCGTCCTGCTGGGCGCGACCGACCTCGGCAGCCTCTCCGACGCA
CAGCTCACCGCGGTGCGTCGCGACCGGCTCGGGTTCGTGTTCCAGTCGTTCAACCTGCTGCCGCAGCTCACCGCCGCGCA
GAACATCGACCTGCCCGCGCGGCTGGCCGGCCGCCGGCCCGACCCGATGTGGCGGGCGGGCCTGATCGACCTGCTCGGTC
TCGGCGACCGGCTCGACCATCGCCCGTCGGAGCTCTCGGGCGGCCAGCAGCAGCGCGTCGCCGTCGCGCGGGCGCTGCTC
GGCAGGCCCGAGATCGTCTTCGCCGACGAGCCGACCGGCAACCTCGACACCGCCGCCGGCCACGAGCTGCTCGATCTGCT
GCGGACGTCGGTGCGCGAGCTCGGGCGCTCGGTCGTGATGGTCACCCACGACCCGGTCGCGGCGTCGTTCGCCGACGGCG
TCGTGCTGCTGCGCGACGGCCGGGTGGCGGGCTCGCTGCCCGATCCCCGCCCGGAGACGGTGCTCGCCGCGCTGTCGTCG
CTGTCGGGGGCGGCGGCGTGA

Protein sequence :
MTAPSCAETVDLVKVHGRGGSAVRALDGVSLRIPEGMFTAVMGPSGSGKSTLLHCLAGLDTASSGRVLLGATDLGSLSDA
QLTAVRRDRLGFVFQSFNLLPQLTAAQNIDLPARLAGRRPDPMWRAGLIDLLGLGDRLDHRPSELSGGQQQRVAVARALL
GRPEIVFADEPTGNLDTAAGHELLDLLRTSVRELGRSVVMVTHDPVAASFADGVVLLRDGRVAGSLPDPRPETVLAALSS
LSGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_5703 YP_004335683.1 phosphonate-transporting ATPase NC_008702.1.4606598. Protein 7e-31 48
Psed_5703 YP_004335683.1 phosphonate-transporting ATPase CP001581.1.gene798.p Protein 8e-39 46
Psed_5703 YP_004335683.1 phosphonate-transporting ATPase CP001581.1.gene598.p Protein 6e-41 44
Psed_5703 YP_004335683.1 phosphonate-transporting ATPase NC_012469.1.7686878. Protein 5e-39 44