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Name : Psed_0559 (Psed_0559) Accession : YP_004330676.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : o-succinylbenzoate--CoA ligase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : 6.2.1.26 Position : 611023 - 612627 bp Length : 1605 bp Strand : - Note : KEGG: rha:RHA1_ro10402 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase DNA sequence : ATGACCGTCGGACACACCGAACTGACCCCGTTGGCGTTCCTGCGCCGCTCGTCGGAGGTCTACCCGGGGAAGACGGCGAT CGTCGCCGGCGAGCGCAGGTACACCTACGCGCAGTTCGCCGCGGAGACGACGCGGGTGGCGCACGCGTTGCGCGGCTCGG GCGTGCAGGCCGGCGACCGGGTCGCCTACCTGCTGCCCAATGTGCCGGAGATGCTCGTCGCGCACTTCGCCGTGCCGCTC GCGGGTGCCGTCCTCGTCGCGATCAACACCCGGTTGTCGACCGAGGAGGTCCGCTACATCCTCGACCACTCCGGGTCGAA GGTGCTGGTCGTCGACGCGGCGCTGTACCCGGTGGTCGCCCCCCTCGTGGGAGAGCTGGCGACGGTCGAGGAGATCATCA CCGTCGTCGACCCGGCGAGCCCCGGCGACGGCATCGGCAGTGGCACCACCTACGGCGACCTGCTCGCCCGTGGCTCCGAC GACCCCCTGCCCTGGGAGGTCGACGACGAGAACCGGGCGATCTCGATCAACTACACCTCGGGGACGACGGGCCGCCCCAA GGGCGTGCAGTACACCCACCGCGGCGCGTACCTGAACTCGTTCGGCGAGGTCGTGCACTCCGCGCACACGCCCGACACCG TCTACCTGTGGACGCTGCCGATGTTCCACTGCAACGGCTGGTGCACCCCGTGGGCGGTCACCGGGATCGGCGGCACCCAC GTCTGCCTGCGCGAGGTCCGGGGTGATGTCATCTGGAAGCTGATCAGCGAGCACGGCGTCACGCACCTCAACGGCGCGCC CACCGTCGTCACCACGATCATGAACGCGGCCGAGGCGGTGAAGCTCGACTACCAGCTGGTGATCACCACCGCGGGCGCCC CGCCGTCGCCGACGACGATCCTGCAGATGGAACGGATGGGCTTCCGCATCGTCCACGTCTACGGGCTCACCGAGACCTAC GGCCCGTACTCGGTCAACCAGTACCAGCGCGCGTGGGACGAGCTCGACGCCGAGGAGCGCGCGGCCCTGCAGGCCCGCCA GGGCGTCGGCATGATCCAGACGGACGCGCTGCGCGTCGTGGACGAGCACATGGTCGACGTGCCGCGCGACGGCGCGACGA TGGGCGAGATCGTCATGCGCGGCAACAACGTCATGGCCGGCTACTACGACGACCCGGAGGGCACCGAGAAGGCGTTCGCA GGCGGCTGGTTCCACTCCGGCGACCTGGGCGTCGTGCATCCCGACGGCTACGTCGAGCTGCGGGACCGGGCGAAGGACGT CGTCATCTCCGGCGGCGAGAACATCTCGACGGTCGAGGTCGAGCAGGCCGTCGTGTCGCACCCGGCGGTGCTGGAGGCGG CCGTCGTCGGCGTGCCCGACGAGCAGTGGGGCGAGCGGCCGAAGGCGTTCGTCGTGCTGAAGGGCGGGCAGCAGACCACG CCGGACGAGGTCATCGAGCACGTGAAGTCGAAGATCGCGCGCTACAAGGCGCCCCGCGACGTCGAGATCGTCGACGAGCT GCCCAAGACCTCGACGGGCAAGGTGCAGAAGTTCGAGCTGCGCGAGAAGGAGTGGGCCGGGCACGGGAGCCGGATCAAGG GCTGA Protein sequence : MTVGHTELTPLAFLRRSSEVYPGKTAIVAGERRYTYAQFAAETTRVAHALRGSGVQAGDRVAYLLPNVPEMLVAHFAVPL AGAVLVAINTRLSTEEVRYILDHSGSKVLVVDAALYPVVAPLVGELATVEEIITVVDPASPGDGIGSGTTYGDLLARGSD DPLPWEVDDENRAISINYTSGTTGRPKGVQYTHRGAYLNSFGEVVHSAHTPDTVYLWTLPMFHCNGWCTPWAVTGIGGTH VCLREVRGDVIWKLISEHGVTHLNGAPTVVTTIMNAAEAVKLDYQLVITTAGAPPSPTTILQMERMGFRIVHVYGLTETY GPYSVNQYQRAWDELDAEERAALQARQGVGMIQTDALRVVDEHMVDVPRDGATMGEIVMRGNNVMAGYYDDPEGTEKAFA GGWFHSGDLGVVHPDGYVELRDRAKDVVISGGENISTVEVEQAVVSHPAVLEAAVVGVPDEQWGERPKAFVVLKGGQQTT PDEVIEHVKSKIARYKAPRDVEIVDELPKTSTGKVQKFELREKEWAGHGSRIKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 9e-112 | 48 |
