|
Name : Psed_5064 (Psed_5064) Accession : YP_004335055.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : (2,3-dihydroxybenzoyl)adenylate synthase Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG1021 EC number : 2.7.7.58 Position : 5419277 - 5420962 bp Length : 1686 bp Strand : - Note : KEGG: saq:Sare_4933 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase DNA sequence : ATGCCCGGCCCCGTCAGTGAGCACACCGTCCCCTGGCCTGCCACGGAGGTCGAGCGGTATGTCGCCGCGGGCTACTGGCA GGGGGTCCCGCTCGGGCACCTGCTCCGTGGGGTCGCCGACCGCACGCCCGATGCGCCCGCGCTCGTCGACGCGGCGACGG GGCTGCGGCTGACCCATCGCGAGCTCGCGGACCGGGCGGACGCCACCGCGGCCCGCCTCCTGGACCTGGGCCTCGCACGC GGCGATCGGATTCTGGTACAGCTCGGGAACGGCGGAGAGTTCGTGATCCTCACCCTGGCCTGCCTCCGCGCCGGGGTCGT ACCGGTGATGGCGCTGCCCGCGCACCGACGGACGGAGCTGAGCCACCTCGCCGCGCACGCCGAGGCCGTGGCGATCGCGG TCCCCGACCGGATGCGGGACTTCGACCACCAGGCGCTCGCCCACGATCTGGGCCCGGGCGTGCAGGAGATCACGGGTGCG GACTGGCTCGTGCTGGTCGACGGCGACCACGTCGACGACGCGAGTGTCGATCTGCGCGCGCTCTGCGGGCCCGGGACGGG GGAGGAGCGCGCCCGGTTGGAGGCGGCCTGTCCCGAGAGCCGGGACGTGGCCGTGTTCCTGCTCTCCGGCGGGACCACCG GTCTTCCCAAACTGATTGCCCGCACCCACGACGACTACGCCTACAACGCTCGGGCCAGCGCGGACATGGCTGGGGTCGAC GCGGACTCGGTGTACCTGGTCAGCCTGCCGGCGGGGCACAACTTTCCGCTCGCCTGCCCGGGCATGCTCGGGGTACTGCT CGCCGGTGGGACCGTCGTCATGCTGCCGTCGCCGGAGCCGACGCGGGCGTTCGCCACGATCGCGGCGGAGGGGGTCACGC ACACCGCTGTCGTCCCGGCGGTTGCCGGCCGCTGGCTGGAGCACGCGGGCGAGCACGGTGCCCCGCCGTCGCTGCGGGTG CTGCAGGTCGGTGGGGCACGCCTGGCCGACGAGCTCGCTCATCGCGTCGAGCCGGTGCTCGGGGCGCGACTGCAGCAGGT GTTCGGGATGGCCGAGGGCCTCCTGAACTTCACCCGCCTGGACGACCCGATCGACGTCATCTGCACCACGCAGGGCCGTC CGATGTGCCCGGACGACGAGGTGCGCCTCGTCGACGAGCTGGACGTCGACGTCGCCGAGGGCACGCCCGGCTCGCTGCTC ACGCGCGGCCCCTACACGCCGCGCGGGTACTACCGCGCCCCCGAGCAGAACGCGCGGGCATTCACAGCGGACGGTTGGTT CCGCTCCGGTGACATCTGCCGCCGTACGCCCGAGGGCAACCTGATCGTGGAGGGCAGGGACAAGGACATGATCAACCGTG GTGGAGAGAAGATCTCCGCCGAGGAGATCGAGAACCTCGTCTACCAGATGCCCGCGGTGGGCCAGGTCGCCGCGGTCGCG ATGCCGGACCGGGAGCTCGGCGAGCGCGTGTGCCTGTACGTCGTGCCCCGGCCGGGCGCGACGCTCACCCTCGACGAGGT GCGCGCAGCCATGGCCGCGCTCGGGGTGGCGAAGTTCAAGTGGCCGGAGCGCTTGGAGATCGTCGATGCGCTGATGTCGA CGAAGGTCGGCAAGATCGACAAGAAAGCGCTGCGGGCCGACGTCGCCGAGCGCCTCGCGCACGAGTCCACCGGAGCGACT CCATGA Protein sequence : MPGPVSEHTVPWPATEVERYVAAGYWQGVPLGHLLRGVADRTPDAPALVDAATGLRLTHRELADRADATAARLLDLGLAR GDRILVQLGNGGEFVILTLACLRAGVVPVMALPAHRRTELSHLAAHAEAVAIAVPDRMRDFDHQALAHDLGPGVQEITGA DWLVLVDGDHVDDASVDLRALCGPGTGEERARLEAACPESRDVAVFLLSGGTTGLPKLIARTHDDYAYNARASADMAGVD ADSVYLVSLPAGHNFPLACPGMLGVLLAGGTVVMLPSPEPTRAFATIAAEGVTHTAVVPAVAGRWLEHAGEHGAPPSLRV LQVGGARLADELAHRVEPVLGARLQQVFGMAEGLLNFTRLDDPIDVICTTQGRPMCPDDEVRLVDELDVDVAEGTPGSLL TRGPYTPRGYYRAPEQNARAFTADGWFRSGDICRRTPEGNLIVEGRDKDMINRGGEKISAEEIENLVYQMPAVGQVAAVA MPDRELGERVCLYVVPRPGATLTLDEVRAAMAALGVAKFKWPERLEIVDALMSTKVGKIDKKALRADVAERLAHESTGAT P |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtE | AAA93464.1 | yersiniabactin 2,3-dihydoxybenzoate-AMP ligase | Virulence | HPI | Protein | 1e-75 | 46 |
| irp5 | CAA73130.1 | Irp5 protein | Virulence | HPI | Protein | 6e-76 | 46 |
| ybtE | YP_853079.1 | yersiniabactin siderophore biosynthetic protein | Virulence | PAI IV APEC-O1 | Protein | 2e-75 | 46 |
| irp5 | YP_002346898.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 2e-75 | 46 |
| ybtE | NP_669710.1 | salicyl-AMP ligase | Virulence | HPI | Protein | 2e-75 | 46 |
| ybtE | NP_993003.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 2e-75 | 46 |
| ybtE | YP_070120.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 2e-75 | 46 |
| ybtE | CAA21394.1 | - | Virulence | HPI | Protein | 2e-75 | 46 |
| irp5 | YP_001006819.1 | yersiniabactin siderophore biosynthetic protein | Virulence | HPI | Protein | 8e-76 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_5064 | YP_004335055.1 | (2,3-dihydroxybenzoyl)adenylate synthase | VFG0168 | Protein | 1e-90 | 48 |
| Psed_5064 | YP_004335055.1 | (2,3-dihydroxybenzoyl)adenylate synthase | VFG1817 | Protein | 4e-83 | 48 |
| Psed_5064 | YP_004335055.1 | (2,3-dihydroxybenzoyl)adenylate synthase | VFG0932 | Protein | 4e-80 | 43 |
