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Name : Psed_5028 (Psed_5028) Accession : YP_004335019.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : winged helix family two component transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 5379786 - 5380529 bp Length : 744 bp Strand : + Note : KEGG: kra:Krad_3036 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver do DNA sequence : ATGACCGGGGTGAACGAGCAGGTCGCCGGCCGACTGCAGCGTGCCGACGGCAGTGCCGTGCGGGTGCTCGTCGTCGACGA CGAGGCCACGCTGTCCGACCTGCTGGGAATGGCGTTGCGCTACGAGGGCTGGGACGTCCGCACCGAGGCCGACGGGGCCT CGGCCGTGCGTGCGGCCCGCGAGTTCCGCCCCGACGCCGTCGTCCTCGACGTGATGCTGCCCGACCTCGACGGCCTGGAG GTGCTGCGCCGCATGCGCGCCGACACCCCGGACGTCCCCGTGCTCTTCCTCACCGCGAAGGACGCCGTCGAGGACCGGGT CGCGGGCCTGACCGCGGGCGGCGACGACTACGTGACCAAGCCGTTCAGCCTCGAGGAGCTGGTCGCCCGGCTGCGGGGGC TGCTGCGCCGCTCCGGGATGACCGCCGCGCAGCAGGGCTCGGAGCTGGCCGTCGGCGACCTGACGCTCGACGAGGACAGC CACGAGGTCCGCCGTGGCGACGTGGAGGTCGACCTCACGGCCACCGAGTTCGAGCTGCTGCGCTTCCTGATGCGCAACCC GCGCCGCGTGCTCAGCAAGGCGCAGATCCTCGACCGCGTGTGGCACTACGACTTCGGCGGACAGTCCAACGTCGTCGAGC TCTACATCTCCTACCTGCGCAAGAAGATCGACAACGGCCGGGCACCGATGATCCACACCGTCCGTGGCGCGGGCTACGTG CTCAAGCCCGCGTCCGGGGAATGA Protein sequence : MTGVNEQVAGRLQRADGSAVRVLVVDDEATLSDLLGMALRYEGWDVRTEADGASAVRAAREFRPDAVVLDVMLPDLDGLE VLRRMRADTPDVPVLFLTAKDAVEDRVAGLTAGGDDYVTKPFSLEELVARLRGLLRRSGMTAAQQGSELAVGDLTLDEDS HEVRRGDVEVDLTATEFELLRFLMRNPRRVLSKAQILDRVWHYDFGGQSNVVELYISYLRKKIDNGRAPMIHTVRGAGYV LKPASGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDB402_0209 | YP_005126722.1 | two-component system response regulator | Not tested | Not named | Protein | 9e-31 | 41 |
| mprA | YP_005684640.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-31 | 41 |
| mprA | YP_005680459.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-31 | 41 |
| mprA | YP_005682550.1 | response regulator mprA | Not tested | PiCp 3 | Protein | 2e-31 | 41 |
| tcsR1 | YP_003782583.1 | two-component system transcriptional regulatory protein | Not tested | PiCp 3 | Protein | 2e-31 | 41 |
| armR | AAN62112.1 | putative response-regulator ArmR | Not tested | PAGI-2(C) | Protein | 3e-21 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | BAC0083 | Protein | 4e-39 | 45 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | BAC0197 | Protein | 1e-34 | 45 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | BAC0125 | Protein | 1e-36 | 43 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | HE999704.1.gene2815. | Protein | 3e-39 | 43 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | BAC0638 | Protein | 2e-31 | 42 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_007622.3794948.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_003923.1003417.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_013450.8614146.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_002951.3238224.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_007793.3914065.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_002758.1121390.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_010079.5776364.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | NC_002952.2859858.p0 | Protein | 1e-39 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | HE999704.1.gene1528. | Protein | 3e-34 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | BAC0308 | Protein | 1e-33 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | AE016830.1.gene1681. | Protein | 6e-40 | 41 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | AE000516.2.gene3505. | Protein | 1e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | VFG1386 | Protein | 4e-63 | 55 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | VFG1389 | Protein | 2e-48 | 51 |
| Psed_5028 | YP_004335019.1 | winged helix family two component transcriptional regulator | VFG1390 | Protein | 2e-52 | 49 |
