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Name : Psed_4858 (Psed_4858) Accession : YP_004334855.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : IstB domain-containing protein ATP-binding protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1484 EC number : - Position : 5217744 - 5218493 bp Length : 750 bp Strand : - Note : KEGG: rer:pREL1_0203 transposition helper protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core DNA sequence : ATGCTGGCCTACCTGGCCAGAGTGTTGAAGACCCCGACCATCGGGCGCTGCTGGGAGGAGCTGGCCGAGCAGGCCCGCGA CGAGAACTGGTCGCACGAGGAGTATCTGGCCGCCGTGCTGCAGCGCCAGGTCGCCGAGCGCGAGTCCGCCGGAACCACGA TGCGGATCCGGACCGCGCACTTCCCGGCGGTGAAGACGATCGAGGACTTCAACCTCGACCACCTGCCCTCGCTACGCCGG GACGTGTTGGCGCACCTGGCCACCGGCACGTTCGTCGCGAAGGCCGAGAACGTGATCCTGCTCGGCCCACCCGGGCTCGG GAAGACCCACCTCGCGATCGGGCTCGGGGTCAAAGCCGCCCACGCCGGCTACTCGGTGCTCTTCGACACCGCGAACAACT GGATCACCCGCCTCGCCGAGGCCCACCAAGCCGGACGGCTCGAGGCCGAGCTGAAGAAGGTCCGCCGCTACAAGCTGATC ATCATCGACGAAGTCGGCTACATCCCCTTCGACCAGGACGCGGCGAACCTGTTCTTCCAGCTCATCGCGTCCCGCTACGA AGTCGGCTCAGTCATGGTCACCTCGAACCTGCCCTTCGGGAAAGCGCACATGTTCGACCGAACCTGTGTCAGGTCGCGCC GAAACATCACGGGTTCGGCAGCCGGCCGGCGTCGACGTGGTCGGCCAGATAGATCAGTGGGGACTGCGGGTCCATCCCGA ACGCGGCCGCGACGAGCTTGGGGTCCATGA Protein sequence : MLAYLARVLKTPTIGRCWEELAEQARDENWSHEEYLAAVLQRQVAERESAGTTMRIRTAHFPAVKTIEDFNLDHLPSLRR DVLAHLATGTFVAKAENVILLGPPGLGKTHLAIGLGVKAAHAGYSVLFDTANNWITRLAEAHQAGRLEAELKKVRRYKLI IIDEVGYIPFDQDAANLFFQLIASRYEVGSVMVTSNLPFGKAHMFDRTCVRSRRNITGSAAGRRRRGRPDRSVGTAGPSR TRPRRAWGP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAB46598.1 | IS100 transposase | Not tested | HPI | Protein | 1e-34 | 43 |
| s0036 | CAD33774.1 | ORF B protein | Not tested | PAI I 536 | Protein | 1e-34 | 43 |
| y1093 | CAD42087.1 | OrfB protein of IS100 transposase | Not tested | PAI II 536 | Protein | 1e-34 | 43 |
| orfB | CAE85183.1 | OrfB protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 1e-34 | 43 |
| api84 | CAF28558.1 | putative transposase | Not tested | YAPI | Protein | 1e-34 | 43 |
| y1093 | CAC43411.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 1e-34 | 43 |
| YPTB1586 | YP_070114.1 | transposase/IS protein | Not tested | HPI | Protein | 2e-34 | 43 |
| unnamed | CAA21402.1 | - | Not tested | HPI | Protein | 2e-34 | 43 |
| y1093 | CAD66188.1 | transposase Orf B, insertion element IS100 | Not tested | PAI III 536 | Protein | 3e-34 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_4858 | YP_004334855.1 | IstB domain-containing protein ATP-binding protein | VFG1515 | Protein | 8e-35 | 43 |
| Psed_4858 | YP_004334855.1 | IstB domain-containing protein ATP-binding protein | VFG1627 | Protein | 8e-35 | 43 |
| Psed_4858 | YP_004334855.1 | IstB domain-containing protein ATP-binding protein | VFG1606 | Protein | 8e-35 | 43 |
| Psed_4858 | YP_004334855.1 | IstB domain-containing protein ATP-binding protein | VFG1663 | Protein | 2e-34 | 43 |
