Gene Information

Name : Psed_4574 (Psed_4574)
Accession : YP_004334579.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 4900722 - 4902143 bp
Length : 1422 bp
Strand : +
Note : TIGRFAM: Glutamine synthetase type I; KEGG: ami:Amir_0925 glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp

DNA sequence : 
GTGTTCAGCAACTCCGAAGAGGTACTCAAGTACATCTCGGACGAGAAGGTCGAGTACGTCGACATCAGGTTCTGCGACCT
GCCCGGCGTCATGCAGCACCTCACCGTCCCCGCCACCACCGCCGCCGACCTGCTCCAGGACGGTGCCGCGTTCGACGGCT
CGTCCGTCCGCGGCTTCCAGGCGATCAACGAGTCGGACATGGCGCTGTTCGCCGACACGGCGACCGCCCGGCTGGACCCG
TTCCGCAAGCACAAGACGCTGAACATCAACTTCTTCGTGCACGACCCGATCACCGGCGAGCCCTACAGCCGCGACCCGCG
CAACATCGCCCGCAAGGCGCAGGAGTACCTCAACGCCTCGGGCATCGCGGACACCGCGTACATGGCCCCGGAGGCCGAGT
TCTACATCTTCGACTCGATCCGCTTCGCGTCGAGCCCGCACGAGACGTTCCACCACATCGACTCCTCCGAGGGCTGGTGG
AACACCGGCCGCGAGGAGGAGGGCGGCAACCTCGGCTACAAGGTCAACTACAAGGGCGGCTACTTCCCCGTCCCGCCGGT
CGACCACTACGCGGACCTGCGCGCCGACATCGTCTCGACGATGACCGCGATGGGCTTCGACGTGGAGCGCGAGCACCACG
AGGTGGGCACCGCGGGTCAGGCGGAGATCAACTACAAGTTCAACACCCTGCTCCACGCCGCCGACGACATCATGCTGTTC
AAGTACATCGTCAAGAACACGGCGTGGCAGCACGGCAAGACGGCCACCTTCATGCCCAAGCCGCTGTTCGGTGACAACGG
CTCCGGCATGCACGTGCACCAGTCGCTGTGGAAGGACGGCCAGCCGCTCTTCCACGACGAGTCCGGCTACGGCGGCCTGT
CCGACACCGCGCGTTACTACATCGGCGGCCTGCTCCACCACGCGCCGTCGCTGCTGGCCTTCACCAACCCGACGGTGAAC
TCCTACCACCGCCTGGTCCCGGGCTTCGAGGCGCCGGTCAACCTGGTGTACTCCGCGCGCAACCGCTCGGCCTGCATCCG
CATCCCGCTCTCGGGCAACAACCCGAAGGCCAAGCGCATCGAGTTCCGCTGCCCCGACTCGTCGGGCAACCCGTACCTGG
CCTTCTCGGCGATGCTGATGGCAGGCCTCGACGGCATCAAGAACAAGATCGAGCCGCCGGCGCCCATCGACAAGGACCTC
TACGAGCTCCCGCCCGAGGAGGCCAAGGACATCCCGCAGGTCCCGGGCAGCCTGGGCGCGGTCATCGACCGGCTCGAGGC
CGACCACGAGTACCTGCTCGAGGGTGGCGTCTTCACGTCCGACCTGATCGAGACGTGGATCTCCTACAAGCGCGAGACGG
AGATCGACCCGCTCCGCCTGCGCCCGCACCCGTACGAGTTCGCCCTGTACTACGACGTCTGA

Protein sequence : 
MFSNSEEVLKYISDEKVEYVDIRFCDLPGVMQHLTVPATTAADLLQDGAAFDGSSVRGFQAINESDMALFADTATARLDP
FRKHKTLNINFFVHDPITGEPYSRDPRNIARKAQEYLNASGIADTAYMAPEAEFYIFDSIRFASSPHETFHHIDSSEGWW
NTGREEEGGNLGYKVNYKGGYFPVPPVDHYADLRADIVSTMTAMGFDVEREHHEVGTAGQAEINYKFNTLLHAADDIMLF
KYIVKNTAWQHGKTATFMPKPLFGDNGSGMHVHQSLWKDGQPLFHDESGYGGLSDTARYYIGGLLHHAPSLLAFTNPTVN
SYHRLVPGFEAPVNLVYSARNRSACIRIPLSGNNPKAKRIEFRCPDSSGNPYLAFSAMLMAGLDGIKNKIEPPAPIDKDL
YELPPEEAKDIPQVPGSLGAVIDRLEADHEYLLEGGVFTSDLIETWISYKRETEIDPLRLRPHPYEFALYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-89 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_4574 YP_004334579.1 glutamine synthetase VFG1399 Protein 1e-174 73