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Name : Psed_4146 (Psed_4146) Accession : YP_004334162.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.4 Position : 4465270 - 4467375 bp Length : 2106 bp Strand : - Note : PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; HAMAP: Potassium-transporting ATPase, B chain; KEGG: sen:SACE_6088 DNA sequence : ATGACCACCTCGTCGACCACCTCTGCGGCGACGACCCAGCCCGACACCGACGGTCGCGACGCGGTGCGCGCGGCGGCGGG CCCGGTGCAGGCCGGTGCCTTCCGGCCCGCGCAGCTGTGGGCCTCGCTGCCGGACGCACTGCGCAAGCTCGACCCGCGGG CCCAGCTGCGCAACCCGGTGATGTTCGTCGTGTGGGTCGGCTCCGTGCTGGTCACCGTGGACGCGATCGTCGACCCGACG GTGTTCGGCTGGCTGATCGCCGTCTGGCTATGGTTCACGGTGCTGTTCGCCAACCTGGCCGAGGCCGTCGCCGAGGGCAG GGGCAAGGCCCAGGCGGAGACGTTGCGCCGCACCAAACGCGACACGGTGGCCCGGCGGCTGACCGCCGACGGCGGCGAGG AGCGCGTCGGCGGCACGGAGCTGCGGATCGGCGACCGGGTCGTCGTGGAGGCGGGGGAGACGATCCCCGGCGACGGCGAC GTCGTCGAGGGCATCGCGACCGTCGACGAGTCGGCCATCACCGGCGAGTCCGCACCCGTCGTGCGGGAGGCGGGCGGCGA CCGGTCCAGCGTCACCGGTGGCACGACCGTGCTGTCGGACCGCATCGTCGTCGAGATCACCACGACGCCGGGGGAGTCGT TCGTCGACCGGATGATCGCGCTCGTCGAGGGCGCGTCGCGGCAGAAGACACCCAACGAGATCGCGCTGACGATCCTGCTC GCCGCGCTGACGATCATCTTCCTGCTCGCGGTCGTCGCGCTGCAGCCGATGAGTGCCTACGCGGGCGGGCTGCAGTCCGT GGTGACGCTGGTGGCCCTCCTGGTCTGCCTGATCCCGACGACGATCGGGGCGCTGCTCTCGGCCATCGGCATCGCGGGCA TGGACCGGCTGGTGCAGCGCAACGTGCTCGCGAAGTCCGGCCGGGCCGTCGAGGCGGCCGGGGACATCGACACCCTGCTG CTGGACAAGACGGGCACGATCACCTTCGGCAACCGGCGGGCGACCGAGCTGATCCCGGTGGGCGACACCTCCCTGGCCGA GCTCGCCGCCGCGGCCCGGCTATCGAGCCTCGCCGACCAGACCCCGGAGGGTCGCAGCATCGTCGAGCTCTGCGCACGCG ACCACGGGCTGGCCGCGGGAGCGACGGCCGACGAGGCCGTGGCGCAGTTCGTCGCGTTCACCGCGCAGACCCGGATGTCC GGCCTCGACCTGCCCGGCCGCGCGGTCCGCAAGGGTGCCGCGGCCGCCGTGCTGGCCTGGGCGGGCACCCGGTCGGACCA GGTCACACGCATCGCCGACGCGATCGGCGACGAGGGCGGTACGCCGCTGGTCGTGGCCGAGGCGGCGGGTCCCGAGGGCG GCTCGGCGCGGGTGCTCGGGATCGTCCGGCTCTCCGACGTCGTCAAGCCCGGCATCGCGGCGCGGTTCGCCGAGCTGCGG GCCATGGGCATCCGGACGGTGATGATCACCGGCGACAACCCCCGCACCGCCAGGGCGATCGCGGCCGAGGCCGGCGTCGA CGACCACCTCGCCGAGGCCACCCCCGAGGACAAGATGGAGCTGATCAGGAAGGAGCAGGAGGGCGGGCGGCTCGTCGCGA TGACCGGCGACGGCACCAACGACGCACCCGCGCTCGCGCAGGCCGACGTCGGCGTCGCGATGAACACCGGGACGGCCGCG GCCAAGGAGGCCGGCAACATGGTCGACCTCGACTCCGACCCGACGAAGCTGATCTCGATCGTCGAGATCGGCAAGCAGCT GCTGATCACCCGCGGCGCGCTGACCACGTTCTCCGTGGCCAACGACCTCGCGAAGTACTTCGCGATCCTGCCCGCGATGT TCGCCGCGCTCTATCCCTCGCTCGGCCTGCTCAACATCATGGGGCTGCACTCGCCGCAGTCCGCGATCCTCTCGGCGGTG ATCTTCAACGCGCTGGTCATCATCGCGCTGATCCCGCTGGCGCTGCGCGGCGTCCGCTACCGGCCCACGTCCGCGGCCGC CCTGCTCCGCCGCAACCTGCTGATCTACGGCCTCGGCGGCGTCGTCACGCCGTTCGTCGGCATCTACCTCATCGACCTGC TGGTCCGACTCATCCCGGGGATGTGA Protein sequence : MTTSSTTSAATTQPDTDGRDAVRAAAGPVQAGAFRPAQLWASLPDALRKLDPRAQLRNPVMFVVWVGSVLVTVDAIVDPT VFGWLIAVWLWFTVLFANLAEAVAEGRGKAQAETLRRTKRDTVARRLTADGGEERVGGTELRIGDRVVVEAGETIPGDGD VVEGIATVDESAITGESAPVVREAGGDRSSVTGGTTVLSDRIVVEITTTPGESFVDRMIALVEGASRQKTPNEIALTILL AALTIIFLLAVVALQPMSAYAGGLQSVVTLVALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAKSGRAVEAAGDIDTLL LDKTGTITFGNRRATELIPVGDTSLAELAAAARLSSLADQTPEGRSIVELCARDHGLAAGATADEAVAQFVAFTAQTRMS GLDLPGRAVRKGAAAAVLAWAGTRSDQVTRIADAIGDEGGTPLVVAEAAGPEGGSARVLGIVRLSDVVKPGIAARFAELR AMGIRTVMITGDNPRTARAIAAEAGVDDHLAEATPEDKMELIRKEQEGGRLVAMTGDGTNDAPALAQADVGVAMNTGTAA AKEAGNMVDLDSDPTKLISIVEIGKQLLITRGALTTFSVANDLAKYFAILPAMFAALYPSLGLLNIMGLHSPQSAILSAV IFNALVIIALIPLALRGVRYRPTSAAALLRRNLLIYGLGGVVTPFVGIYLIDLLVRLIPGM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-148 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 7e-149 | 58 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 4e-138 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-137 | 53 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-137 | 53 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 3e-137 | 53 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-137 | 53 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 4e-137 | 53 |
