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Name : Psed_3988 (Psed_3988) Accession : YP_004334007.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : o-succinylbenzoate--CoA ligase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : 6.2.1.26 Position : 4280862 - 4282436 bp Length : 1575 bp Strand : - Note : KEGG: gob:Gobs_2329 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase DNA sequence : ATGACGGATCTGTCGTTCGAGCCGCTGACGCCGGTGTCCTATCTCGATCGCGCGGCGGCCGCGCACGGCGACCGCGTCGC GGTGATCGACGGCGAGCTCCGACTGACCTACCGCGAGTTCCACGACCGCTGCAGGCGCCTCGCGGGTGGCCTCGCCCCGT TGGCGGGCGGGCGCCCCGTCGCGTTCCTCGCCCCGAACACCCACGTGCTGCTGGAGTCGAACTACGGCGTGCCGTGGGCG GGGTCGCCGCTGGTCGCGATCAACACCCGGCTCTCGGCCGGCGAGGTCGCCTACATCCTCGAGCACTCCGGTGCGGCCGT GCTGGTCCACGACCCCGTGTTCGACGAGCTCGTCGACGACGCCCTCGCCCGGCTCGCCGGCTCCGGCACGGCCGCGCCCG CGCGCATCCGGGCGGGGGAGGAGTACGAGGCCCTGCTCGCGGGCGCGTCGCCGCTGGCCGTCACCCCCGACGACGAGCGC GCGCTGCTCTCGATCAACTACACGTCCGGGACGACGGGCCGCCCCAAGGGCGTCATGTACCACCATCGCGGCGCCTACCT GCAGGCGTTGGCGATGGTCGGGCACACCGGGATGTCGCCCTCGACGGTGCACCTGTGGACGCTGCCGATGTTCCACTGCA ACGGCTGGTGCTTCCCGTGGGCCGTCACCGCCGCGGCCGGCACGCACGTCTGCCTCGACAAGGTCGATCCCGCGCGGGTC TGGCAGCTGATCCGCGAGGAGGGTGTCACTCACCTCAACGGGGCGCCGACGGTGCTGTCGATGCTGGCCTACGCCGAGCA GGCCGGTGAGGGCGTGCCCGGCGACCGCGTGGTCCGGATCGCGACGGGCGGGGCGCCCCCGTCCCCGGCGATCCTGCGCC GGATGGCCGGCCTCGGTTTCGACGTCACCCACCTCTACGGGCTCACCGAGACGTTCGGCCCGGCGATGATCTGCGACTGG CGCCCGGAGTGGAACGGCCTCGACGCAGAGGAGCAGGCCCGGCTCAAGGCGCGCCAGGGCGTCGGCAACATGATCTCCTG CACCGCCCGGATCGTCGACGACAACGGCGCCGACCTGCCGGCCGACGGCACCTCGGTGGGCCAGATCGCCCTGCGCGGCA ACAACGTCATGCTCGGGTACTTCAAGGACCCCGAGGCGACCGCGGCGGCCGCGCCCGACGGCTGGTTCCGCACGGGCGAC CTCGGGGTGATGCATCCCGACGGCTACGTCGAGCTGCGCGACCGCAGCAAGGACGTGATCATCTCCGGGGGCGAGAACAT CGCGAGCGTCGAGGTCGAGCAGGCCGTCGCCGAGCACCCGGCCGTCCTCGAGGTCGCGGTGATCGCGGTGCCCGACGAGC GCTGGGGAGAGGTCCCGGCCGCCTACGTGACCCTGCACGCCGGCGCGTCGGTGACCGAGCAGGAGATCATCGAGCACGTC AAGGGCAGGCTCGCGCGGTTCAAGGCACCGAAGACCGTCGTGTTCGGCGAGCTGCCCAAGACCTCCACCGGCAAGATCCA GAAGTTCGTCCTCCGGGAGAAGGCGTGGGCGGGCGTCGAGCGGCGGATCCAGTAG Protein sequence : MTDLSFEPLTPVSYLDRAAAAHGDRVAVIDGELRLTYREFHDRCRRLAGGLAPLAGGRPVAFLAPNTHVLLESNYGVPWA GSPLVAINTRLSAGEVAYILEHSGAAVLVHDPVFDELVDDALARLAGSGTAAPARIRAGEEYEALLAGASPLAVTPDDER ALLSINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGMSPSTVHLWTLPMFHCNGWCFPWAVTAAAGTHVCLDKVDPARV WQLIREEGVTHLNGAPTVLSMLAYAEQAGEGVPGDRVVRIATGGAPPSPAILRRMAGLGFDVTHLYGLTETFGPAMICDW RPEWNGLDAEEQARLKARQGVGNMISCTARIVDDNGADLPADGTSVGQIALRGNNVMLGYFKDPEATAAAAPDGWFRTGD LGVMHPDGYVELRDRSKDVIISGGENIASVEVEQAVAEHPAVLEVAVIAVPDERWGEVPAAYVTLHAGASVTEQEIIEHV KGRLARFKAPKTVVFGELPKTSTGKIQKFVLREKAWAGVERRIQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 3e-103 | 48 |
