Gene Information

Name : Psed_3607 (Psed_3607)
Accession : YP_004333631.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase pdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 3861819 - 3862748 bp
Length : 930 bp
Strand : -
Note : TIGRFAM: Vitamin B6 biosynthesis protein; HAMAP: Vitamin B6 biosynthesis protein; KEGG: sna:Snas_2410 pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein

DNA sequence : 
GTGTCGTCCGACCAGGCCGTTCCCACCCCCGCCGCCGAGCAGACCGACGCCGTGCAGGGCACCGCGCGTGTCAAGCGCGG
CATGGCGGAGATGCTCAAGGGCGGCGTGATCATGGACGTCGTCACGCCCGAGCAGGCGAAGATCGCCGAGGACGCGGGCG
CCGTCGCGGTCATGGCCCTCGAGCGCGTCCCCGCCGACATCCGCGCCCAGGGCGGTGTCGCGCGCATGAGCGACCCCGAC
ATGATCGACGGGATCGTCAACGCCGTCAGCATCCCGGTGATGGCCAAGGCGCGCATCGGGCACTTCGTCGAGGCGCAGGT
CCTGCAGTCGCTGGGCGTCGACTACGTCGACGAGTCCGAGGTCCTCACGCCGGCCGACGAGGCGCACCACATCGACAAGT
GGGCCTTCACCGTGCCGTTCGTGTGCGGCGCGACCAACCTGGGCGAGGCCCTGCGCCGGATCGCCGAGGGCGCGGCGATG
ATCCGGTCGAAGGGCGAGGCGGGCACCGGCAACGTCGTCGAGGCCACCCGGCACATGCGCCAGATCCGCAGCGACATCCG
CCGTCTCGCCACGCTCGACGAGACCGAGCTGTACGTCGCGGCCAAGGAGCTGCGGGCGCCGGTCGAGCTGGTCCGCGAGG
TCGCGGCCGCGGGCAAGCTGCCCGTCGTCCTGTTCACCGCGGGCGGCATCGCCACCCCGGCCGACGCCGCGATGATGATG
CAGCTCGGCGCCGAGGGCGTGTTCGTCGGCTCGGGCATCTTCAAGTCCGGCGACCCGGCCCAGCGTGCGGCGGCGATCGT
CAAGGCCACCACGTTCCACGACGACCCCGACGTGATCGCCAAGGTCTCGCGCGGGCTGGGCGAGGCGATGGTCGGGATCA
ACATCCCCGATCTGCCCGCCGAGCAGCGGTACGCCGACCGCGGCTGGTGA

Protein sequence : 
MSSDQAVPTPAAEQTDAVQGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVARMSDPD
MIDGIVNAVSIPVMAKARIGHFVEAQVLQSLGVDYVDESEVLTPADEAHHIDKWAFTVPFVCGATNLGEALRRIAEGAAM
IRSKGEAGTGNVVEATRHMRQIRSDIRRLATLDETELYVAAKELRAPVELVREVAAAGKLPVVLFTAGGIATPADAAMMM
QLGAEGVFVGSGIFKSGDPAQRAAAIVKATTFHDDPDVIAKVSRGLGEAMVGINIPDLPAEQRYADRGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-111 79
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-111 79
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-111 79