|
Name : Psed_3429 (Psed_3429) Accession : YP_004333471.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : riboflavin synthase subunit alpha Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0307 EC number : 2.5.1.9 Position : 3667230 - 3667862 bp Length : 633 bp Strand : - Note : TIGRFAM: Lumazine-binding protein; KEGG: sgr:SGR_6090 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein DNA sequence : ATGTTCACCGGGATCGTCGAGGAGGTCGGCGAGATCGTCGAGGTGCGCCACGACGGCGACGTCGTGGTGCTCACCGTGCG GGGGCCGCGCGTCTCCGAGGACGCGGCCCACGGCGACTCTATCGCCGTCAACGGCTGCTGCCTCACCGTCGTCGACGACG AGGGCGCCGCCGACGACAGGTTCCGCCTCGAGCTGGTGCCCGAGACCCTGAAACGGACGTCGCTGGGTGCCGCGGCCGCG GGGGTGAAGGTCAACCTCGAGCGGGCGCTGCCGGCCGGGGGCCGGCTCGGCGGGCACATCGTGCAGGGCCACGTCGACGG CGTCGCGACGCTGGTCAGCCGGACCCCGGGCGAGCGCAGCGACGAGGTGCGCTTCAGCCTGCCGCCCGAGCTGGCGCGGT ACGTCGTGGAGAAGGGCTCGATCGCGGTCGACGGGGTCTCGCTGACGGTCGCGGCGACCGACGCCGACACCTTCACCGTC GCCCTCATCCCCACGACGTTGGCGGACACCACACTCGGAATCCGTGCTCCGGGGGATACCGTCAACCTCGAGGTTGATGT CGTCGCGAAATACGTCGAACGGCTGACCGCCGGGTACCGGCGCGGCGCCGACGAGGAGGCAGGGGTCCAGTGA Protein sequence : MFTGIVEEVGEIVEVRHDGDVVVLTVRGPRVSEDAAHGDSIAVNGCCLTVVDDEGAADDRFRLELVPETLKRTSLGAAAA GVKVNLERALPAGGRLGGHIVQGHVDGVATLVSRTPGERSDEVRFSLPPELARYVVEKGSIAVDGVSLTVAATDADTFTV ALIPTTLADTTLGIRAPGDTVNLEVDVVAKYVERLTAGYRRGADEEAGVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00291 | YP_008207756.1 | Riboflavin synthase alpha chain | Not tested | AbaR25 | Protein | 2e-25 | 45 |
| BJAB0868_00295 | YP_008211621.1 | Riboflavin synthase alpha chain | Not tested | AbaR26 | Protein | 2e-25 | 45 |
