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Name : Psed_3406 (Psed_3406) Accession : YP_004333448.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 3641457 - 3643544 bp Length : 2088 bp Strand : + Note : SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: ami:Amir_5186 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal DNA sequence : GTGTCAGCGACCGACGTCTCCCCCCTGCTGCGCGCCGACGTACCGGCCGACTGGACCGAGCTCGACCGCAAGGCCGTCGA CACGGTCCGGGTGCTCGCCGCGGACGCCGTCCAGAAGGCCGGAAACGGTCACCCCGGCACGGCGATGAGCCTGGCACCGT TGGCGTACACGCTCTTCCAGCGCGTCATGCGGCACGATCCGTCCGATGCGGACTGGCCCGGCCGCGACCGGTTCGTGCTG TCCTGCGGCCACTCCAGCCTGACGCTCTACCTGCAGCTCTACCTGTCGGGCTACGGCCTCACCATCGACGACCTCGCGGC GCTGCGGACCTGGGGCTCCAAGACCCCCGGCCACCCCGAACACCGGCACACCCCCGGCGTCGAGATCACCACGGGGCCGC TGGGGCAGGGCCTGGCGTCGGCGGTGGGGATGGCGATGGCCGCCCGCCGCGAGCGCGGCCTGTTCGACCCGGACGCCCCC GAGGGCGCGAGCCCGTTCGACCACCAGATCTACGTCATCGCCTCCGACGGCGACATCGAGGAGGGCATCACCTCCGAGGC GTCGTCGCTGGCCGGGCGCCAGGCGCTGGGCAACCTCACCGTCGTCTACGACGACAACAAGATCTCCATCGAGGACAACA CGAACATCGCGCTGTCCGAGGACACCGCGGCGCGCTACGAGGCCTACGGCTGGCACGTGCAGGTCGTCGAGGGCGGGGAG AACGTCACCGGCATCCTCGCGGCGCTGGAGGCCGCCCGCGCCGAGACGCAGCGGCCCTCGTTCATCCTGCTCCGGACGAT CATCGGCTACCCGGCCCCCAACAAGATGAACACCGGCGCCGCGCACGGGGCCGCACTGGGAGCCGACGAGGTCGCGGCCG TCAAGGAGGCGCTCGGCTTCGACCCGGCGAAGAGCTTCGACGTCGACCCCGAGGCCCTCGCCCACGCCCGCGAGGTCCGC GACCGCGGCCGCCGCGCGCACGAGGAGTGGCAGAAGTCGTTCGACGACTGGTCCGCCCGCGAGCCCGAGCGCCGCAAGCT CTACGACCGGCTCGTCGCCCAGCAGCTCCCGGACGGCTGGGAGAAGGCGCTGCCGAGCTGGGAGCCCGACCCCAAGGGCA TCGCCACCCGCAAGGCGTCGGGCGAGGTGCTCAACGCACTCGCCGACGTGCTGCCGGAGCTGTGGGGTGGTTCGGCCGAC CTCGCCGAGAGCAACAACACGACGATGAAGGGCGCCGACTCGTTCGGCCCCAAGGACGCCGCCACCGGCATGTGGAACGC GAACCCGTACGGCCGGACGCTGCACTTCGGCATCCGCGAGCACGCGATGGGCGCCGCGCTCAACGGCATCGCGCTACACG GCCCGACCCGGCCGTACGGCGGCACGTTCCTCGTGTTCAGCGACTACATGCGTCCGTCGGTGCGGCTCGCCGCCCTGATG AAGGCCGACCCGATCTTCGTGTGGACCCACGACTCGATCGGCCTCGGCGAGGACGGCCCCACCCACCAGCCCGTCGAGCA CTTCGCGGCGTTGCGCGCCATCCCGGGCCTGGCGTTCGTCCGCCCGGGAGACGCCAACGAGACCGCCGCCGCCTGGAAGG CGACCCTCGAGCGCCGCGACGGGCCCGTCGGCCTCGCGCTGACCCGGCAGAACCTGCCGGTGCTGGAGGGCACGTCCACC GAGGGCGTCGCGCGCGGCGGGTACGTGCTGGCCAAGGAGTCCGGGGCCGACGGGCCCGCGCTGATCTTCATCGCGACGGG CTCGGAGGTCCAGATCGCCGTCGAGGCCCGCACCGTTCTCGAGGCCGAGGGCGTGCCCACCCGCGTGGTGTCGATGCCGT GCGTCGAGTGGTTCGAGGAGCAGGACGACCTCTACCGCGAGGACGTGCTGCCCGCCGCGACCCGCGCCCGGGTCTCGATC GAGGCGGGCATCGCGATGCCCTGGTACCGCTACACCGGCGACGCCGGCGAGCACGTCTCGATCGAGCACTTCGGCGCGAG CGCGGACTACCAGACGTTGTTCCGCGAGTTCGGGATCACGACCGAAGCCGCCGTCGCGGCGGCCCGCAAGAGCCTCGCGC GGGCATGA Protein sequence : MSATDVSPLLRADVPADWTELDRKAVDTVRVLAADAVQKAGNGHPGTAMSLAPLAYTLFQRVMRHDPSDADWPGRDRFVL SCGHSSLTLYLQLYLSGYGLTIDDLAALRTWGSKTPGHPEHRHTPGVEITTGPLGQGLASAVGMAMAARRERGLFDPDAP EGASPFDHQIYVIASDGDIEEGITSEASSLAGRQALGNLTVVYDDNKISIEDNTNIALSEDTAARYEAYGWHVQVVEGGE NVTGILAALEAARAETQRPSFILLRTIIGYPAPNKMNTGAAHGAALGADEVAAVKEALGFDPAKSFDVDPEALAHAREVR DRGRRAHEEWQKSFDDWSAREPERRKLYDRLVAQQLPDGWEKALPSWEPDPKGIATRKASGEVLNALADVLPELWGGSAD LAESNNTTMKGADSFGPKDAATGMWNANPYGRTLHFGIREHAMGAALNGIALHGPTRPYGGTFLVFSDYMRPSVRLAALM KADPIFVWTHDSIGLGEDGPTHQPVEHFAALRAIPGLAFVRPGDANETAAAWKATLERRDGPVGLALTRQNLPVLEGTST EGVARGGYVLAKESGADGPALIFIATGSEVQIAVEARTVLEAEGVPTRVVSMPCVEWFEEQDDLYREDVLPAATRARVSI EAGIAMPWYRYTGDAGEHVSIEHFGASADYQTLFREFGITTEAAVAAARKSLARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-120 | 46 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 4e-115 | 45 |
