|
Name : Psed_3350 (Psed_3350) Accession : YP_004333393.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.24 Position : 3578685 - 3580154 bp Length : 1470 bp Strand : + Note : KEGG: svi:Svir_30180 succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain DNA sequence : ATGACTGATCCGAATCGTGAACAGTCCGTCGTCGACTCCGTGCCCCACCAGCTGCTCATCGACGGCAGCTGGCGCCCTGC GGGATCCGGCGCGACCACCGTCGTCGAGGACCCGGCGACGGAGAAGGCGCTGTGCGAGGTCGCCGACGCCGGTCGCGACG ACGGCCTCGCTGCGCTCGCCGCCGCCGACCGCGCGCAGCCGGCGTTCGCCGCGATGGCCCCGCGCGAGCGGTCCGACATC CTGCGCCGCGCCTACGAGGCGGTGCTGGCCCGCGTCGAGGACCTGGCGCTGCTGATGACCCTCGAGATGGGCAAGCCGCT CGCCGAGGCCCGCGGCGAGGTCACCTACGCCGCCGAGTTCCTGCGCTGGTTCTCCGAGGAGGCCGTGCGCGTCGACGGCG GCTTCGCCGTGTCCCCCGACGGCCGCAACCGGTTCCTGGTGATGCGCCAGGCCGTCGGGGTCAGCGTGTTCGTCACGCCG TGGAACTTTCCGCTCGCCATGGGTACCCGCAAGATCGCCCCCGCGATCGCGGCCGGGTGCGCGATGGTCGTCAAGCCCGC CCCGCAGACACCGCTGTCGATGCTGGCGCTCGCGCAGATCCTGCAGGAGGTCGGGCTCCCCGACGGCGTGCTCAACGTCG TCACCACGACCGACGCCGCCGACGTCGTCGAACCGGTCCTGCGCGACGGGCGGGCCCGCAAGCTGTCGTTCACCGGGTCG ACCGCGGTCGGCCGGCTGCTGCTGGAGCAGGCCTCGTCGAAGGTGCTGCGCACGTCGATGGAGCTCGGTGGCAACGCCGC GTTCCTCGTGTTCGACGACGCCGACGTCGACCGCGCGGTCGAGGGTGCGATGCAGGCGAAGATGCGCAACATGGGCGAGG CCTGCACGGCGGCCAACCGCTTCCTCGTGCAGCGCGGCATCGCCGACGAGTTCTCCCGGCGGCTGGCCGACCGGATGGGC GCGCTCACCGTCGGCCGCGGCACCGAGGACGGGGTGCAGGTCGGGCCGATGATCGACGGCAAGGGCCGCGACAAGATCGT CGACCTGGTCGGCGACGCTGTGGCGCACGGCGCGGAGGTCGTCCTCGGCGGGGAGCGCGCCGACGGCCCCGGCTACTTCT ACCGCCCGACCGTGCTCACCGGGGTGCCCGCGCACTCGCGGCTCAACAGCGAGGAGATCTTCGGACCCGTCGCCCCGATC ACCGTGTTCGACGACGAGGCGCAGGCCCTCGCCGACGCCAACGCCACCGACTTCGGCCTGGTCGACTACGTGTTCACCCA GGACCTCGACCGGGCGCTGCGGGTGTCCGAGCGGCTCGAGGCCGGCATGGTCGGGCTCAACACCGGCCTCGTCTCCAATC CGGCGGCGCCGTTCGGCGGCATCAAGCAGTCCGGGCTCGGGCGCGAGGGCGGCACCGTGGGCATCGACGAGTTCCTGGAG ACGAAGTACGTGGCCATCGCCACCGCCTGA Protein sequence : MTDPNREQSVVDSVPHQLLIDGSWRPAGSGATTVVEDPATEKALCEVADAGRDDGLAALAAADRAQPAFAAMAPRERSDI LRRAYEAVLARVEDLALLMTLEMGKPLAEARGEVTYAAEFLRWFSEEAVRVDGGFAVSPDGRNRFLVMRQAVGVSVFVTP WNFPLAMGTRKIAPAIAAGCAMVVKPAPQTPLSMLALAQILQEVGLPDGVLNVVTTTDAADVVEPVLRDGRARKLSFTGS TAVGRLLLEQASSKVLRTSMELGGNAAFLVFDDADVDRAVEGAMQAKMRNMGEACTAANRFLVQRGIADEFSRRLADRMG ALTVGRGTEDGVQVGPMIDGKGRDKIVDLVGDAVAHGAEVVLGGERADGPGYFYRPTVLTGVPAHSRLNSEEIFGPVAPI TVFDDEAQALADANATDFGLVDYVFTQDLDRALRVSERLEAGMVGLNTGLVSNPAAPFGGIKQSGLGREGGTVGIDEFLE TKYVAIATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-84 | 48 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 9e-96 | 46 |
