Gene Information

Name : Psed_3179 (Psed_3179)
Accession : YP_004333228.1
Strain : Pseudonocardia dioxanivorans CB1190
Genome accession: NC_015312
Putative virulence/resistance : Virulence
Product : LuxR family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3396243 - 3396956 bp
Length : 714 bp
Strand : -
Note : KEGG: sma:SAV_2438 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator Lu

DNA sequence : 
GTGAGCGGCGACGGTGGCGACGCGCGGCCGATCCGGGTCGTCGTCGCCGACGACCAGCGGGTCGTGCGCGAGGGGCTGAC
GATGGTCCTGGGGCTGATGCCGGAGCTGGAGGTCGTCGGGGCGGCGTCCGACGGCGCCGAGGCCGTGGCCCTCGCCGAGC
GGCTGGACCCGGACGTCGTGCTGATGGACCTGCGGATGCCGCGCTGCGACGGCGTCGAGGCGACCCGGCTGCTGCGCGAA
CGCCGGCCGGGGGTGCGCGTCGTCGTGCTCACGACGTACTCCGACGACCGCTCGGTCCTCGACGCGCTGCGGGCCGGCGC
CCGCGGCTACCTCACCAAGGACGCGGGCGGCCCGGAGATCCGCGAGGCGCTGCGCCGGGTCCTCGACGACCGGGCGGCGA
TCGACCCCGCGGTGCAGCACCATCTCCTGGAGGCGCTCGCGGGCGGCCGGCCCGAACCGGTTCCCGTTGCGCCGCAACGC
CCGGCGGGGCTCACCGCGCGCGAGGCCGAGGTGCTGACGCTCGTCGCCGAAGGGTTGTCCAACGCCGAGATCGCGCGCCG
GCTCGTCGTGTCGGAGGGCACGGTCAAGTCGCACATGAACCACCTGCTGGCCAAGATCGACGCCCGCGACCGGGCGCAGG
CCGTGGCGTTCGCCTACCGCAACGGGCTCGTCGCACCCCCGACGGCTAGTTGGCGCGACGGCCCCATGCGGTGA

Protein sequence : 
MSGDGGDARPIRVVVADDQRVVREGLTMVLGLMPELEVVGAASDGAEAVALAERLDPDVVLMDLRMPRCDGVEATRLLRE
RRPGVRVVVLTTYSDDRSVLDALRAGARGYLTKDAGGPEIREALRRVLDDRAAIDPAVQHHLLEALAGGRPEPVPVAPQR
PAGLTAREAEVLTLVAEGLSNAEIARRLVVSEGTVKSHMNHLLAKIDARDRAQAVAFAYRNGLVAPPTASWRDGPMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
regB YP_001220830.1 putative two-component system response regulator Not tested chp/tomA region Protein 5e-25 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psed_3179 YP_004333228.1 LuxR family transcriptional regulator VFG1824 Protein 3e-24 41