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Name : Psed_3070 (Psed_3070) Accession : YP_004333122.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Unknown Product : major facilitator superfamily protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 3274583 - 3276004 bp Length : 1422 bp Strand : + Note : PFAM: Major facilitator superfamily MFS-1; KEGG: rha:RHA1_ro03382 MFS superfamily tartrate symporter DNA sequence : GTGTCCGCAGCCGAGCCCGAGCCGGGGGCCGTCACCACCCCGACCGAGGGCGCGATCCGCAAGGCGATGTGGCGGCTGCT GCCGCTGCTGGGCCTGTGCTACCTGCTCAACTACGTCGACCGGGTCAACGTCGGGTTCGCGTCGGTGACGATGCGCCCCG ACCTGGGCCTCTCGGCGACCGCCTACGGCCTCGGGGCCGGGCTGTTCTTCATCGGGTACTTCTTCTTCGAGGTGCCGAGC AACGTCATCCTGCACCGCGTCGGCGCCCGGCTCTGGATCGCCCGCATCATGATCAGCTGGGGGATCATCGCGTCGGCGAC GGCGTTCGTGCAGGGCCCGACCAGCTTCTACGTCGTGCGGTTCCTGCTGGGCTTCGCCGAGGCGGGGTTCTTCCCCGGCA TCATCCTGTACCTGACGTACTGGTTCCCGAGGGTGCAGCGGGCCCGTGTCGTCGCGCTGTTCTTCCTGGCGGTGCCGCTG TCGTCGGTGGTCGGCGGGCCGCTGTCGGGGCTGCTCATCGACCACGGCGAGGGCGTCCTCGGGTTCGACGCCGGCTGGCG GTTCATGTTCTTCCTCGAGGGCCTGCCCGCGTTCCTGCTGGGCATCGTGGTGCTGTTCGTGCTGCCCGACCGGCCGCGCA AGGCCCGCTGGCTGCGCCGCGAGGAGGCGGCGGCGCTGGAGGACACGATCGCCCGTGAGGACGCCGCGGAGGTGCCGCAC GCGCCCGGGCTGCGCGCGGCGCTGGCCGACCGGCGGGTGATCGCGCTGTCGGTCGTCTACTTCGGTGTCGTGTTCGGGCT CTACGTGCTCGCGTTCTTCCTGCCCCAGGTCGTCGACGAGCTCTCGACGTCGCTGTCGGCCACCGTCATCGGGCTGGTGA CGGCCATCCCGTACGCGGTCGCGGCGGTGGTCATGGTCGTCGTGGCCCGCAGCTCGGACCGCACGGGGGAGCGGGTGCTG CACGTCGCCGTGCCGGTGCTGCTCGGCGCCGCCGCCGTCGCCGTCGCCCTCTACCTCGACTCGCCCGCGCTCGTGATCGC CGCCGTGACGGTGTGCGCGTGCGGGGTGTTCGCCGCGATCCCCGTGATCTGGCAGCTGCCGCCGACGTTCCTCACCGGTG TCGGCGCGGCCGCGGGCATCGCGCTGATCAACTCGTTCGGCAACCTCAGCGGGTTCGTCGGGCCGTACCTGACCGGCTGG CTGGAGGACCTCACCGGGTCGCTGCGTGCGGGGATGTGGTGCGTCGCGGGGTTCATGACGTTGTCGGCGGTGATCGTGCT GCTACTGGGCCGCTCGGTGCGGGAGGCCGGGCGGCCCGCGGCTGCCGGGGCGGGCGGCGGCGGGGATAGGTTGGTCGCGC CCGACCACCCCGGCACGCGACCCCCCCGCCACGTGACCCGCACCGACTGGAGCGCCGAATGA Protein sequence : MSAAEPEPGAVTTPTEGAIRKAMWRLLPLLGLCYLLNYVDRVNVGFASVTMRPDLGLSATAYGLGAGLFFIGYFFFEVPS NVILHRVGARLWIARIMISWGIIASATAFVQGPTSFYVVRFLLGFAEAGFFPGIILYLTYWFPRVQRARVVALFFLAVPL SSVVGGPLSGLLIDHGEGVLGFDAGWRFMFFLEGLPAFLLGIVVLFVLPDRPRKARWLRREEAAALEDTIAREDAAEVPH APGLRAALADRRVIALSVVYFGVVFGLYVLAFFLPQVVDELSTSLSATVIGLVTAIPYAVAAVVMVVVARSSDRTGERVL HVAVPVLLGAAAVAVALYLDSPALVIAAVTVCACGVFAAIPVIWQLPPTFLTGVGAAAGIALINSFGNLSGFVGPYLTGW LEDLTGSLRAGMWCVAGFMTLSAVIVLLLGRSVREAGRPAAAGAGGGGDRLVAPDHPGTRPPRHVTRTDWSAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 1e-61 | 48 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-59 | 48 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-59 | 48 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-59 | 48 |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-59 | 48 |
