|
Name : Psed_2977 (Psed_2977) Accession : YP_004333030.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : betaine-aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.8 Position : 3157257 - 3158732 bp Length : 1476 bp Strand : + Note : KEGG: mjl:Mjls_4075 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde dehydrogenase domain DNA sequence : ATGGCGGATCTCGAGCACTTCCGGATGGTGATCGGCGGCAAGCCGGTCGACGCGATCTCGGGAGCGACGTTCGAGTCGGA GAACCCCTACACCGGGCGGCCGTGGGCCGTCCTGCCCGACGGCGGGACCGAGGACGTCGACGCGGCGGTCGCGGCGGCGA GGGCGGCGTTCGACGGCGAGTGGGGCGAGCTGACCGGGTTCGCCCGCGCGGCGCTGATGCGTCGCCTCGGCGACCTGATC GGGGAGAACGCCGAGCGGCTCGCCCGGCTGGAGGTCAACGACTCCGGCAAGCTCTACCGGGAGATGCTGGGCCAGCTCAA CGGGCTGGGCGGCTGGTTCCACTACTACGCGGGGCTGGCCGACAAGCTCGAGGGACGTCAGATCCCCTCGCCCAACCCGA ACTACCTCGTCTACACCCGCCGGGAGCCGGTCGGCGTCGTCGCGGCGATCACGCCGTGGAACTCGCCGCTGCTGCTGCTG ACGTGGAAGGTGGCACCCGCCCTCGCGGCCGGATGCACGGTCGTCGTCAAGCCGTCGGAGCACGCGCCGGCGTCGTCGCT GGGCCTGGCCGAGCTGTTCGAGCAGGCCGGCTTCCCCGCGGGCGTGGTCAACGTCGTCACCGGACGCTCCCGCGAGCTCG GGGCCCACCTCGCCGGGCACCCCGGCGTCGACAAGGTGGCGTTCACCGGCTCGACGGCCACCGGCCGTGCCGTCGCGCAC GCCGCCGCGGAGAACCTCAACAAGGTCACCCTCGAGCTCGGCGGCAAGTCCCCGCAGGTCGTGTTCGCCGACGCGGACCT CGAGGCCGCGTCCAACGGGCTCGTCGCCGGCGTCTTCGCCGCCACCGGGCAGACCTGCATGGCCGGGTCGCGGCTGATCG TGCACGAGTCGGTGCACGACGACCTCGTGCGGCTGGTGGCGGAGCGGGCATCACGGATCCGGCTCGGCGACCCCAACGAC CCCGACACCGAGATGGGTCCGGTGGCGAACCGGCCGCAGTACGAGAAGGTGCTCGGCTACCTGGAGACGGCCAAGGGCGA GGGTGCGACGGTCGCCTACGGCGGGGCCGCCGACACGGGACTCGGCGGGCTGTTCGTGAAGCCGACGGTGCTCACCGGTG TGGGACCGGAGTCGACGGTCGTCCGCGAGGAGGTGTTCGGCCCGGTGCTCTCCGCGTACACGTTCAGCACCGAGGAGGAG GCGATCAAGCTCGCCAACGACACCCAGTACGGCCTCGCCGGGGCGGTCTGGACCAAGGACGTGCACCGCGCGCACCGGGT CGCGGCCAGGATCCGGGCGGGGTCGGTGTGGATCAACGCCTACCGCGTCGTCGCCCCGAGCGTGCCGTTCGGCGGCTACA AGAGCTCGGGCCTGGGCCGGGAGAACGGCGTCGAGGCGGTCAACGAGTACACCGAGAACAAGTCGGTGTGGGTCGAGCTG ACGGGCGGCACCCGCGACCCGTTCACCCTCGGCTGA Protein sequence : MADLEHFRMVIGGKPVDAISGATFESENPYTGRPWAVLPDGGTEDVDAAVAAARAAFDGEWGELTGFARAALMRRLGDLI GENAERLARLEVNDSGKLYREMLGQLNGLGGWFHYYAGLADKLEGRQIPSPNPNYLVYTRREPVGVVAAITPWNSPLLLL TWKVAPALAAGCTVVVKPSEHAPASSLGLAELFEQAGFPAGVVNVVTGRSRELGAHLAGHPGVDKVAFTGSTATGRAVAH AAAENLNKVTLELGGKSPQVVFADADLEAASNGLVAGVFAATGQTCMAGSRLIVHESVHDDLVRLVAERASRIRLGDPND PDTEMGPVANRPQYEKVLGYLETAKGEGATVAYGGAADTGLGGLFVKPTVLTGVGPESTVVREEVFGPVLSAYTFSTEEE AIKLANDTQYGLAGAVWTKDVHRAHRVAARIRAGSVWINAYRVVAPSVPFGGYKSSGLGRENGVEAVNEYTENKSVWVEL TGGTRDPFTLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaE | AAO17179.1 | HpaE | Not tested | tcd island | Protein | 1e-65 | 43 |
| ORF SG19 | AAN62241.1 | putative aldehyde dehydrogenase | Not tested | PAGI-3(SG) | Protein | 7e-69 | 43 |
| unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 3e-69 | 42 |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 2e-67 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_2977 | YP_004333030.1 | betaine-aldehyde dehydrogenase | VFG0082 | Protein | 7e-68 | 41 |
