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Name : Psed_2912 (Psed_2912) Accession : YP_004332965.1 Strain : Pseudonocardia dioxanivorans CB1190 Genome accession: NC_015312 Putative virulence/resistance : Virulence Product : ABC transporter permease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0609 EC number : - Position : 3076660 - 3077703 bp Length : 1044 bp Strand : + Note : PFAM: ABC transporter permease; KEGG: sro:Sros_7986 ABC transporter, permease, Fe3+-siderophore transport system DNA sequence : ATGACGACGCTCGCGCGCGAGCGCGCCCAGCGGCCGTCCCGCACACCGCGCCGCCGCCGGCTCACCGGGCTGCTGGTGTT GGCGTGCCTGGTCCTCCTCGTGTGCCTGGCGAGCGTCGCCGTCGGCGCCAAGGCGATCCCGCTCGACCACGTGTGGCACG CGCTGATCGCCCCGACCGGCACGGAGGACGACGTCGTCATCCGGTCGCTGCGCATCCCGCGGACCGTGCTCGGCCTGCTG GCCGGTGCGGCCCTGGGGCTGGCGGGCGCGCTCATGCAGGGCCACACCCGCAACCCCCTCGCCGACCCCGGGCTGCTCGG CGTCAACGCCGGTGCCGCGTTCCTGGTCGTCGTCGGCATCTACGTCTTCGGCGTCAGCTCGCTGTCGGGCTACGTGTGGT TCGCGTTCGCGGGCGCCCTCGGGGCGAGCGTCGCGGTGTTCGCGCTCGGCGCGGTCGGCCGCCGCGGCGGCGCGACCCCG GTGACGCTGGCCGTCGCCGGCGCGGCGGTCTCGGCGCTGCTGTTCGGGCTCACGTCCGCGGTGATCCTCACCGACGTCCG CACGCTCGACGCCTACCGCTTCTGGAACGTCGGGTCGCTGGCCGGGCGCGAACCCGCGATCGCGGGCCAGGTGGCGCCGT TCCTGCTGGCGGGGGCGCTGATCGCGCTGGCGACGGCTCCCGCGCTCAACGCGCTCTCGCTCGGCGACGACGTCGCCCGC TCGCTCGGGCACTCGGTGCGCCGGACCCGGGTCCTCGGCGTCGCCGCGATCACGCTGCTCGCCGGCTCCGCGACGGCGGC GTGCGGGCCGATCGCGTTCCTCGGGCTGATCGTGCCGCACGTCGTGCGCTCGTTCACCGGCCCGGACCACCGCTGGCTGC TCCCGGCCTCCGCGCTCTCGGGTGCCGTCCTGCTGCTGACCGCCGACGTCGTCGGACGCGTGGTGGCCCGGCCCGGGGAG CTGCAGGTCGGGATCGTGCTGGCGCTGCTCGGGGCGCCGTTCTTCATCGCGCTCGTGCGCCGTCGCAAGCTGGCCCAGCT GTGA Protein sequence : MTTLARERAQRPSRTPRRRRLTGLLVLACLVLLVCLASVAVGAKAIPLDHVWHALIAPTGTEDDVVIRSLRIPRTVLGLL AGAALGLAGALMQGHTRNPLADPGLLGVNAGAAFLVVVGIYVFGVSSLSGYVWFAFAGALGASVAVFALGAVGRRGGATP VTLAVAGAAVSALLFGLTSAVILTDVRTLDAYRFWNVGSLAGREPAIAGQVAPFLLAGALIALATAPALNALSLGDDVAR SLGHSVRRTRVLGVAAITLLAGSATAACGPIAFLGLIVPHVVRSFTGPDHRWLLPASALSGAVLLLTADVVGRVVARPGE LQVGIVLALLGAPFFIALVRRRKLAQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SPN23F_09540 | YP_002510937.1 | ferric siderophore ABC transporter permease | Virulence | PPI-1 | Protein | 7e-30 | 43 |
| SP_1033 | NP_345508.1 | iron ABC transporter permease | Virulence | PPI-1 | Protein | 6e-30 | 42 |
| fagA | YP_005680309.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-18 | 41 |
| fagA | YP_005682399.1 | hypothetical protein | Virulence | PiCp 1 | Protein | 7e-18 | 41 |
| fagA | YP_003782432.1 | integral membrane protein | Virulence | PiCp 1 | Protein | 7e-18 | 41 |
| fagA | YP_005684490.1 | hypothetical protein | Not tested | PiCp 1 | Protein | 7e-18 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psed_2912 | YP_004332965.1 | ABC transporter permease | VFG0926 | Protein | 2e-29 | 50 |
